Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav5-1A0A075B5Z7 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trav5-1A0A075B5Z7 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trav5-1A0A075B5Z7 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trav5-1A0A075B5Z7 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav5-1A0A075B5Z7 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav5-1A0A075B5Z7 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trav5-1A0A075B5Z7 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC16.59■□□□□ 0.25
Trav5-1A0A075B5Z7 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC16.59■□□□□ 0.25
Trav5-1A0A075B5Z7 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC16.59■□□□□ 0.25
Trav5-1A0A075B5Z7 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav5-1A0A075B5Z7 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav5-1A0A075B5Z7 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Trav5-1A0A075B5Z7 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trav5-1A0A075B5Z7 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC16.58■□□□□ 0.25
Trav5-1A0A075B5Z7 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trav5-1A0A075B5Z7 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Trav5-1A0A075B5Z7 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trav5-1A0A075B5Z7 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC16.58■□□□□ 0.24
Trav5-1A0A075B5Z7 Gm26571-201ENSMUST00000181399 666 ntBASIC16.58■□□□□ 0.24
Trav5-1A0A075B5Z7 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav5-1A0A075B5Z7 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav5-1A0A075B5Z7 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Trav5-1A0A075B5Z7 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC16.58■□□□□ 0.24
Trav5-1A0A075B5Z7 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav5-1A0A075B5Z7 Hsf1-207ENSMUST00000228371 2102 ntBASIC16.58■□□□□ 0.24
Trav5-1A0A075B5Z7 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav5-1A0A075B5Z7 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.58■□□□□ 0.24
Trav5-1A0A075B5Z7 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Trav5-1A0A075B5Z7 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav5-1A0A075B5Z7 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav5-1A0A075B5Z7 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav5-1A0A075B5Z7 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trav5-1A0A075B5Z7 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav5-1A0A075B5Z7 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trav5-1A0A075B5Z7 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav5-1A0A075B5Z7 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav5-1A0A075B5Z7 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC16.57■□□□□ 0.24
Trav5-1A0A075B5Z7 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Trav5-1A0A075B5Z7 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trav5-1A0A075B5Z7 Gm7291-201ENSMUST00000199147 382 ntBASIC16.57■□□□□ 0.24
Trav5-1A0A075B5Z7 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trav5-1A0A075B5Z7 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC16.57■□□□□ 0.24
Trav5-1A0A075B5Z7 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav5-1A0A075B5Z7 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav5-1A0A075B5Z7 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav5-1A0A075B5Z7 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav5-1A0A075B5Z7 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav5-1A0A075B5Z7 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav5-1A0A075B5Z7 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav5-1A0A075B5Z7 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC16.56■□□□□ 0.24
Trav5-1A0A075B5Z7 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav5-1A0A075B5Z7 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav5-1A0A075B5Z7 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC16.56■□□□□ 0.24
Trav5-1A0A075B5Z7 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC16.56■□□□□ 0.24
Trav5-1A0A075B5Z7 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC16.56■□□□□ 0.24
Trav5-1A0A075B5Z7 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trav5-1A0A075B5Z7 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav5-1A0A075B5Z7 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav5-1A0A075B5Z7 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav5-1A0A075B5Z7 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav5-1A0A075B5Z7 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav5-1A0A075B5Z7 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trav5-1A0A075B5Z7 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trav5-1A0A075B5Z7 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Trav5-1A0A075B5Z7 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trav5-1A0A075B5Z7 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Trav5-1A0A075B5Z7 AC164629.5-201ENSMUST00000220387 632 ntBASIC16.55■□□□□ 0.24
Trav5-1A0A075B5Z7 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav5-1A0A075B5Z7 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav5-1A0A075B5Z7 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trav5-1A0A075B5Z7 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC16.55■□□□□ 0.24
Trav5-1A0A075B5Z7 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav5-1A0A075B5Z7 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trav5-1A0A075B5Z7 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Trav5-1A0A075B5Z7 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC16.54■□□□□ 0.24
Trav5-1A0A075B5Z7 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav5-1A0A075B5Z7 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC16.54■□□□□ 0.24
Trav5-1A0A075B5Z7 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Trav5-1A0A075B5Z7 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trav5-1A0A075B5Z7 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Trav5-1A0A075B5Z7 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC16.54■□□□□ 0.24
Trav5-1A0A075B5Z7 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav5-1A0A075B5Z7 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC16.54■□□□□ 0.24
Trav5-1A0A075B5Z7 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav5-1A0A075B5Z7 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav5-1A0A075B5Z7 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav5-1A0A075B5Z7 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
Trav5-1A0A075B5Z7 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
Trav5-1A0A075B5Z7 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav5-1A0A075B5Z7 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav5-1A0A075B5Z7 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trav5-1A0A075B5Z7 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC16.53■□□□□ 0.24
Trav5-1A0A075B5Z7 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav5-1A0A075B5Z7 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC16.53■□□□□ 0.24
Trav5-1A0A075B5Z7 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav5-1A0A075B5Z7 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav5-1A0A075B5Z7 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trav5-1A0A075B5Z7 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trav5-1A0A075B5Z7 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms