Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Smad6-203ENSMUST00000179458 273 ntBASIC19.38■□□□□ 0.69
Trbv4A0A075B5I2 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.38■□□□□ 0.69
Trbv4A0A075B5I2 Gm8493-201ENSMUST00000196881 489 ntBASIC19.38■□□□□ 0.69
Trbv4A0A075B5I2 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.38■□□□□ 0.69
Trbv4A0A075B5I2 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trbv4A0A075B5I2 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trbv4A0A075B5I2 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.38■□□□□ 0.69
Trbv4A0A075B5I2 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trbv4A0A075B5I2 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Trbv4A0A075B5I2 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trbv4A0A075B5I2 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trbv4A0A075B5I2 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trbv4A0A075B5I2 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Trbv4A0A075B5I2 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.37■□□□□ 0.69
Trbv4A0A075B5I2 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Trbv4A0A075B5I2 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.37■□□□□ 0.69
Trbv4A0A075B5I2 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Trbv4A0A075B5I2 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Trbv4A0A075B5I2 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trbv4A0A075B5I2 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.37■□□□□ 0.69
Trbv4A0A075B5I2 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Trbv4A0A075B5I2 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trbv4A0A075B5I2 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trbv4A0A075B5I2 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trbv4A0A075B5I2 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trbv4A0A075B5I2 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.36■□□□□ 0.69
Trbv4A0A075B5I2 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trbv4A0A075B5I2 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trbv4A0A075B5I2 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Trbv4A0A075B5I2 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trbv4A0A075B5I2 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trbv4A0A075B5I2 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.35■□□□□ 0.69
Trbv4A0A075B5I2 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trbv4A0A075B5I2 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trbv4A0A075B5I2 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Trbv4A0A075B5I2 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trbv4A0A075B5I2 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trbv4A0A075B5I2 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trbv4A0A075B5I2 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trbv4A0A075B5I2 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
Trbv4A0A075B5I2 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trbv4A0A075B5I2 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.35■□□□□ 0.69
Trbv4A0A075B5I2 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
Trbv4A0A075B5I2 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trbv4A0A075B5I2 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trbv4A0A075B5I2 Gm45417-201ENSMUST00000209533 758 ntBASIC19.34■□□□□ 0.69
Trbv4A0A075B5I2 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trbv4A0A075B5I2 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trbv4A0A075B5I2 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trbv4A0A075B5I2 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trbv4A0A075B5I2 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trbv4A0A075B5I2 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trbv4A0A075B5I2 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trbv4A0A075B5I2 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.33■□□□□ 0.68
Trbv4A0A075B5I2 Gm6139-201ENSMUST00000079261 882 ntBASIC19.33■□□□□ 0.68
Trbv4A0A075B5I2 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Trbv4A0A075B5I2 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.33■□□□□ 0.68
Trbv4A0A075B5I2 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trbv4A0A075B5I2 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trbv4A0A075B5I2 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Trbv4A0A075B5I2 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trbv4A0A075B5I2 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trbv4A0A075B5I2 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.32■□□□□ 0.68
Trbv4A0A075B5I2 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trbv4A0A075B5I2 Gm11421-201ENSMUST00000122124 294 ntBASIC19.32■□□□□ 0.68
Trbv4A0A075B5I2 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trbv4A0A075B5I2 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trbv4A0A075B5I2 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trbv4A0A075B5I2 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Trbv4A0A075B5I2 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trbv4A0A075B5I2 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.31■□□□□ 0.68
Trbv4A0A075B5I2 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.31■□□□□ 0.68
Trbv4A0A075B5I2 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trbv4A0A075B5I2 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.31■□□□□ 0.68
Trbv4A0A075B5I2 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trbv4A0A075B5I2 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trbv4A0A075B5I2 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trbv4A0A075B5I2 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Trbv4A0A075B5I2 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trbv4A0A075B5I2 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trbv4A0A075B5I2 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trbv4A0A075B5I2 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trbv4A0A075B5I2 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trbv4A0A075B5I2 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Trbv4A0A075B5I2 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trbv4A0A075B5I2 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trbv4A0A075B5I2 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trbv4A0A075B5I2 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trbv4A0A075B5I2 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Trbv4A0A075B5I2 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trbv4A0A075B5I2 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.3■□□□□ 0.68
Trbv4A0A075B5I2 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trbv4A0A075B5I2 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trbv4A0A075B5I2 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.3■□□□□ 0.68
Trbv4A0A075B5I2 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trbv4A0A075B5I2 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trbv4A0A075B5I2 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trbv4A0A075B5I2 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trbv4A0A075B5I2 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trbv4A0A075B5I2 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 85.9 ms