Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.36■□□□□ 0.69
H2afb2S4R1M3 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
H2afb2S4R1M3 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
H2afb2S4R1M3 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.35■□□□□ 0.69
H2afb2S4R1M3 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
H2afb2S4R1M3 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.35■□□□□ 0.69
H2afb2S4R1M3 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
H2afb2S4R1M3 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
H2afb2S4R1M3 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
H2afb2S4R1M3 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
H2afb2S4R1M3 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.35■□□□□ 0.69
H2afb2S4R1M3 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
H2afb2S4R1M3 Gm27454-201ENSMUST00000185090 204 ntBASIC19.35■□□□□ 0.69
H2afb2S4R1M3 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
H2afb2S4R1M3 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
H2afb2S4R1M3 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
H2afb2S4R1M3 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
H2afb2S4R1M3 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
H2afb2S4R1M3 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
H2afb2S4R1M3 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
H2afb2S4R1M3 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
H2afb2S4R1M3 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
H2afb2S4R1M3 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
H2afb2S4R1M3 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.34■□□□□ 0.69
H2afb2S4R1M3 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
H2afb2S4R1M3 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
H2afb2S4R1M3 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.34■□□□□ 0.69
H2afb2S4R1M3 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.34■□□□□ 0.69
H2afb2S4R1M3 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
H2afb2S4R1M3 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
H2afb2S4R1M3 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
H2afb2S4R1M3 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
H2afb2S4R1M3 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
H2afb2S4R1M3 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
H2afb2S4R1M3 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
H2afb2S4R1M3 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
H2afb2S4R1M3 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
H2afb2S4R1M3 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
H2afb2S4R1M3 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
H2afb2S4R1M3 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
H2afb2S4R1M3 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
H2afb2S4R1M3 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
H2afb2S4R1M3 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
H2afb2S4R1M3 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.33■□□□□ 0.68
H2afb2S4R1M3 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
H2afb2S4R1M3 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
H2afb2S4R1M3 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
H2afb2S4R1M3 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
H2afb2S4R1M3 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
H2afb2S4R1M3 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
H2afb2S4R1M3 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.33■□□□□ 0.68
H2afb2S4R1M3 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
H2afb2S4R1M3 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
H2afb2S4R1M3 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
H2afb2S4R1M3 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.32■□□□□ 0.68
H2afb2S4R1M3 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
H2afb2S4R1M3 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
H2afb2S4R1M3 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
H2afb2S4R1M3 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.32■□□□□ 0.68
H2afb2S4R1M3 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
H2afb2S4R1M3 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
H2afb2S4R1M3 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
H2afb2S4R1M3 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
H2afb2S4R1M3 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.32■□□□□ 0.68
H2afb2S4R1M3 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
H2afb2S4R1M3 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
H2afb2S4R1M3 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
H2afb2S4R1M3 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.31■□□□□ 0.68
H2afb2S4R1M3 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
H2afb2S4R1M3 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
H2afb2S4R1M3 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
H2afb2S4R1M3 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
H2afb2S4R1M3 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
H2afb2S4R1M3 Gm8493-201ENSMUST00000196881 489 ntBASIC19.31■□□□□ 0.68
H2afb2S4R1M3 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
H2afb2S4R1M3 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.31■□□□□ 0.68
H2afb2S4R1M3 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.3■□□□□ 0.68
H2afb2S4R1M3 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
H2afb2S4R1M3 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
H2afb2S4R1M3 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
H2afb2S4R1M3 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
H2afb2S4R1M3 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
H2afb2S4R1M3 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
H2afb2S4R1M3 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
H2afb2S4R1M3 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
H2afb2S4R1M3 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
H2afb2S4R1M3 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
H2afb2S4R1M3 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.29■□□□□ 0.68
H2afb2S4R1M3 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.29■□□□□ 0.68
H2afb2S4R1M3 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
H2afb2S4R1M3 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
H2afb2S4R1M3 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
H2afb2S4R1M3 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.28■□□□□ 0.68
H2afb2S4R1M3 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
H2afb2S4R1M3 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
H2afb2S4R1M3 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
H2afb2S4R1M3 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
H2afb2S4R1M3 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
H2afb2S4R1M3 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
H2afb2S4R1M3 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms