Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Nr1h3Q9Z0Y9 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nr1h3Q9Z0Y9 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nr1h3Q9Z0Y9 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Nr1h3Q9Z0Y9 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nr1h3Q9Z0Y9 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nr1h3Q9Z0Y9 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Nr1h3Q9Z0Y9 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Nr1h3Q9Z0Y9 Ap3s1-204ENSMUST00000225520 957 ntBASIC21.03■□□□□ 0.96
Nr1h3Q9Z0Y9 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Nr1h3Q9Z0Y9 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Nr1h3Q9Z0Y9 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nr1h3Q9Z0Y9 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nr1h3Q9Z0Y9 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nr1h3Q9Z0Y9 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nr1h3Q9Z0Y9 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nr1h3Q9Z0Y9 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nr1h3Q9Z0Y9 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nr1h3Q9Z0Y9 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nr1h3Q9Z0Y9 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nr1h3Q9Z0Y9 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC21.02■□□□□ 0.96
Nr1h3Q9Z0Y9 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nr1h3Q9Z0Y9 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nr1h3Q9Z0Y9 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Nr1h3Q9Z0Y9 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Nr1h3Q9Z0Y9 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Nr1h3Q9Z0Y9 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC21.02■□□□□ 0.96
Nr1h3Q9Z0Y9 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nr1h3Q9Z0Y9 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nr1h3Q9Z0Y9 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nr1h3Q9Z0Y9 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nr1h3Q9Z0Y9 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
Nr1h3Q9Z0Y9 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Nr1h3Q9Z0Y9 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Nr1h3Q9Z0Y9 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nr1h3Q9Z0Y9 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nr1h3Q9Z0Y9 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC21.01■□□□□ 0.95
Nr1h3Q9Z0Y9 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Nr1h3Q9Z0Y9 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nr1h3Q9Z0Y9 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Nr1h3Q9Z0Y9 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC21.01■□□□□ 0.95
Nr1h3Q9Z0Y9 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Nr1h3Q9Z0Y9 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nr1h3Q9Z0Y9 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Nr1h3Q9Z0Y9 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Nr1h3Q9Z0Y9 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC21■□□□□ 0.95
Nr1h3Q9Z0Y9 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC21■□□□□ 0.95
Nr1h3Q9Z0Y9 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Nr1h3Q9Z0Y9 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Nr1h3Q9Z0Y9 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nr1h3Q9Z0Y9 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nr1h3Q9Z0Y9 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.99■□□□□ 0.95
Nr1h3Q9Z0Y9 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nr1h3Q9Z0Y9 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Nr1h3Q9Z0Y9 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC20.99■□□□□ 0.95
Nr1h3Q9Z0Y9 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Nr1h3Q9Z0Y9 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nr1h3Q9Z0Y9 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Nr1h3Q9Z0Y9 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nr1h3Q9Z0Y9 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Nr1h3Q9Z0Y9 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Nr1h3Q9Z0Y9 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.98■□□□□ 0.95
Nr1h3Q9Z0Y9 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Nr1h3Q9Z0Y9 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Nr1h3Q9Z0Y9 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
Nr1h3Q9Z0Y9 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Nr1h3Q9Z0Y9 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Nr1h3Q9Z0Y9 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nr1h3Q9Z0Y9 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nr1h3Q9Z0Y9 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nr1h3Q9Z0Y9 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nr1h3Q9Z0Y9 Gm12669-201ENSMUST00000122162 1009 ntBASIC20.97■□□□□ 0.95
Nr1h3Q9Z0Y9 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC20.97■□□□□ 0.95
Nr1h3Q9Z0Y9 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Nr1h3Q9Z0Y9 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nr1h3Q9Z0Y9 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nr1h3Q9Z0Y9 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nr1h3Q9Z0Y9 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.96■□□□□ 0.95
Nr1h3Q9Z0Y9 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nr1h3Q9Z0Y9 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC20.96■□□□□ 0.95
Nr1h3Q9Z0Y9 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nr1h3Q9Z0Y9 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nr1h3Q9Z0Y9 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nr1h3Q9Z0Y9 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.96■□□□□ 0.95
Nr1h3Q9Z0Y9 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nr1h3Q9Z0Y9 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nr1h3Q9Z0Y9 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.95■□□□□ 0.95
Nr1h3Q9Z0Y9 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nr1h3Q9Z0Y9 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.95■□□□□ 0.94
Nr1h3Q9Z0Y9 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC20.95■□□□□ 0.94
Nr1h3Q9Z0Y9 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nr1h3Q9Z0Y9 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nr1h3Q9Z0Y9 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nr1h3Q9Z0Y9 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nr1h3Q9Z0Y9 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nr1h3Q9Z0Y9 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nr1h3Q9Z0Y9 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nr1h3Q9Z0Y9 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nr1h3Q9Z0Y9 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nr1h3Q9Z0Y9 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms