Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Gm9959-201ENSMUST00000068277 390 ntBASIC14.96□□□□□ -0.01
CcsQ9WU84 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
CcsQ9WU84 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CcsQ9WU84 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CcsQ9WU84 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
CcsQ9WU84 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC14.96□□□□□ -0.02
CcsQ9WU84 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CcsQ9WU84 AC164883.3-201ENSMUST00000227396 1774 ntBASIC14.96□□□□□ -0.02
CcsQ9WU84 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC14.95□□□□□ -0.02
CcsQ9WU84 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CcsQ9WU84 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CcsQ9WU84 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CcsQ9WU84 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC14.95□□□□□ -0.02
CcsQ9WU84 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CcsQ9WU84 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CcsQ9WU84 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CcsQ9WU84 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC14.95□□□□□ -0.02
CcsQ9WU84 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC14.95□□□□□ -0.02
CcsQ9WU84 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CcsQ9WU84 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
CcsQ9WU84 Gm44949-201ENSMUST00000206423 1450 ntBASIC14.95□□□□□ -0.02
CcsQ9WU84 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
CcsQ9WU84 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
CcsQ9WU84 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CcsQ9WU84 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC14.94□□□□□ -0.02
CcsQ9WU84 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CcsQ9WU84 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
CcsQ9WU84 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
CcsQ9WU84 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CcsQ9WU84 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CcsQ9WU84 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CcsQ9WU84 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CcsQ9WU84 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC14.94□□□□□ -0.02
CcsQ9WU84 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CcsQ9WU84 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CcsQ9WU84 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CcsQ9WU84 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
CcsQ9WU84 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CcsQ9WU84 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CcsQ9WU84 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CcsQ9WU84 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC14.93□□□□□ -0.02
CcsQ9WU84 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CcsQ9WU84 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CcsQ9WU84 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC14.93□□□□□ -0.02
CcsQ9WU84 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CcsQ9WU84 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CcsQ9WU84 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CcsQ9WU84 Gm14117-201ENSMUST00000122417 843 ntBASIC14.93□□□□□ -0.02
CcsQ9WU84 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC14.93□□□□□ -0.02
CcsQ9WU84 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC14.93□□□□□ -0.02
CcsQ9WU84 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC14.93□□□□□ -0.02
CcsQ9WU84 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CcsQ9WU84 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CcsQ9WU84 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CcsQ9WU84 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CcsQ9WU84 Gm43548-201ENSMUST00000197139 2353 ntBASIC14.92□□□□□ -0.02
CcsQ9WU84 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CcsQ9WU84 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC14.92□□□□□ -0.02
CcsQ9WU84 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CcsQ9WU84 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CcsQ9WU84 Gm5540-201ENSMUST00000131852 1848 ntBASIC14.92□□□□□ -0.02
CcsQ9WU84 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CcsQ9WU84 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
CcsQ9WU84 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CcsQ9WU84 Gm44832-201ENSMUST00000208849 2303 ntBASIC14.92□□□□□ -0.02
CcsQ9WU84 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CcsQ9WU84 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CcsQ9WU84 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CcsQ9WU84 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CcsQ9WU84 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CcsQ9WU84 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CcsQ9WU84 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CcsQ9WU84 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CcsQ9WU84 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CcsQ9WU84 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CcsQ9WU84 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CcsQ9WU84 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CcsQ9WU84 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CcsQ9WU84 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CcsQ9WU84 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CcsQ9WU84 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CcsQ9WU84 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
CcsQ9WU84 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CcsQ9WU84 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CcsQ9WU84 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC14.91□□□□□ -0.02
CcsQ9WU84 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC14.91□□□□□ -0.02
CcsQ9WU84 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CcsQ9WU84 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CcsQ9WU84 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CcsQ9WU84 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CcsQ9WU84 Gm5953-201ENSMUST00000220644 2616 ntBASIC14.91□□□□□ -0.02
CcsQ9WU84 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CcsQ9WU84 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CcsQ9WU84 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CcsQ9WU84 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CcsQ9WU84 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CcsQ9WU84 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CcsQ9WU84 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
CcsQ9WU84 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CcsQ9WU84 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms