Protein–RNA interactions for Protein: Q9QZS8

Sh2d3c, SH2 domain-containing protein 3C, mousemouse

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d3cQ9QZS8 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sh2d3cQ9QZS8 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Sh2d3cQ9QZS8 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sh2d3cQ9QZS8 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.84■□□□□ 0.61
Sh2d3cQ9QZS8 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sh2d3cQ9QZS8 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
Sh2d3cQ9QZS8 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Sh2d3cQ9QZS8 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sh2d3cQ9QZS8 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sh2d3cQ9QZS8 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sh2d3cQ9QZS8 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sh2d3cQ9QZS8 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Sh2d3cQ9QZS8 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sh2d3cQ9QZS8 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sh2d3cQ9QZS8 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Sh2d3cQ9QZS8 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.83■□□□□ 0.61
Sh2d3cQ9QZS8 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Sh2d3cQ9QZS8 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Sh2d3cQ9QZS8 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.83■□□□□ 0.6
Sh2d3cQ9QZS8 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.82■□□□□ 0.6
Sh2d3cQ9QZS8 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sh2d3cQ9QZS8 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sh2d3cQ9QZS8 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sh2d3cQ9QZS8 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sh2d3cQ9QZS8 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sh2d3cQ9QZS8 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sh2d3cQ9QZS8 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
Sh2d3cQ9QZS8 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sh2d3cQ9QZS8 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sh2d3cQ9QZS8 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sh2d3cQ9QZS8 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sh2d3cQ9QZS8 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sh2d3cQ9QZS8 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Sh2d3cQ9QZS8 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sh2d3cQ9QZS8 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sh2d3cQ9QZS8 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sh2d3cQ9QZS8 Gm42501-201ENSMUST00000200220 1026 ntBASIC18.81■□□□□ 0.6
Sh2d3cQ9QZS8 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
Sh2d3cQ9QZS8 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sh2d3cQ9QZS8 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sh2d3cQ9QZS8 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sh2d3cQ9QZS8 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
Sh2d3cQ9QZS8 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.81■□□□□ 0.6
Sh2d3cQ9QZS8 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sh2d3cQ9QZS8 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Sh2d3cQ9QZS8 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sh2d3cQ9QZS8 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sh2d3cQ9QZS8 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.8■□□□□ 0.6
Sh2d3cQ9QZS8 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Sh2d3cQ9QZS8 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Sh2d3cQ9QZS8 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC18.8■□□□□ 0.6
Sh2d3cQ9QZS8 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sh2d3cQ9QZS8 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sh2d3cQ9QZS8 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sh2d3cQ9QZS8 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sh2d3cQ9QZS8 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Sh2d3cQ9QZS8 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sh2d3cQ9QZS8 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sh2d3cQ9QZS8 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.8■□□□□ 0.6
Sh2d3cQ9QZS8 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Sh2d3cQ9QZS8 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sh2d3cQ9QZS8 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sh2d3cQ9QZS8 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sh2d3cQ9QZS8 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sh2d3cQ9QZS8 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sh2d3cQ9QZS8 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sh2d3cQ9QZS8 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Sh2d3cQ9QZS8 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sh2d3cQ9QZS8 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sh2d3cQ9QZS8 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Sh2d3cQ9QZS8 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Sh2d3cQ9QZS8 AC093043.1-201ENSMUST00000226700 898 ntBASIC18.79■□□□□ 0.6
Sh2d3cQ9QZS8 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sh2d3cQ9QZS8 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Sh2d3cQ9QZS8 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sh2d3cQ9QZS8 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sh2d3cQ9QZS8 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sh2d3cQ9QZS8 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sh2d3cQ9QZS8 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sh2d3cQ9QZS8 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Sh2d3cQ9QZS8 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Sh2d3cQ9QZS8 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC18.78■□□□□ 0.6
Sh2d3cQ9QZS8 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.78■□□□□ 0.6
Sh2d3cQ9QZS8 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sh2d3cQ9QZS8 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sh2d3cQ9QZS8 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sh2d3cQ9QZS8 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sh2d3cQ9QZS8 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.78■□□□□ 0.6
Sh2d3cQ9QZS8 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sh2d3cQ9QZS8 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sh2d3cQ9QZS8 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Sh2d3cQ9QZS8 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sh2d3cQ9QZS8 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sh2d3cQ9QZS8 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sh2d3cQ9QZS8 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sh2d3cQ9QZS8 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.77■□□□□ 0.6
Sh2d3cQ9QZS8 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sh2d3cQ9QZS8 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Sh2d3cQ9QZS8 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sh2d3cQ9QZS8 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms