Protein–RNA interactions for Protein: Q9JJ43

Rbfox1, RNA binding protein fox-1 homolog 1, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox1Q9JJ43 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rbfox1Q9JJ43 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Rbfox1Q9JJ43 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rbfox1Q9JJ43 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rbfox1Q9JJ43 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rbfox1Q9JJ43 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
Rbfox1Q9JJ43 Gm45640-201ENSMUST00000210665 1896 ntBASIC16.44■□□□□ 0.22
Rbfox1Q9JJ43 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
Rbfox1Q9JJ43 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rbfox1Q9JJ43 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Rbfox1Q9JJ43 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Rbfox1Q9JJ43 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rbfox1Q9JJ43 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rbfox1Q9JJ43 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rbfox1Q9JJ43 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rbfox1Q9JJ43 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Rbfox1Q9JJ43 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
Rbfox1Q9JJ43 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rbfox1Q9JJ43 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rbfox1Q9JJ43 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rbfox1Q9JJ43 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rbfox1Q9JJ43 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rbfox1Q9JJ43 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rbfox1Q9JJ43 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Rbfox1Q9JJ43 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rbfox1Q9JJ43 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Rbfox1Q9JJ43 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rbfox1Q9JJ43 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rbfox1Q9JJ43 Gm20100-201ENSMUST00000209418 2272 ntBASIC16.43■□□□□ 0.22
Rbfox1Q9JJ43 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.42■□□□□ 0.22
Rbfox1Q9JJ43 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Rbfox1Q9JJ43 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rbfox1Q9JJ43 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rbfox1Q9JJ43 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rbfox1Q9JJ43 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC16.42■□□□□ 0.22
Rbfox1Q9JJ43 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rbfox1Q9JJ43 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16.42■□□□□ 0.22
Rbfox1Q9JJ43 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rbfox1Q9JJ43 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rbfox1Q9JJ43 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rbfox1Q9JJ43 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rbfox1Q9JJ43 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rbfox1Q9JJ43 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC16.41■□□□□ 0.22
Rbfox1Q9JJ43 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC16.41■□□□□ 0.22
Rbfox1Q9JJ43 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rbfox1Q9JJ43 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rbfox1Q9JJ43 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Rbfox1Q9JJ43 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Rbfox1Q9JJ43 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rbfox1Q9JJ43 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rbfox1Q9JJ43 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rbfox1Q9JJ43 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC16.4■□□□□ 0.22
Rbfox1Q9JJ43 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Rbfox1Q9JJ43 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rbfox1Q9JJ43 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rbfox1Q9JJ43 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rbfox1Q9JJ43 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rbfox1Q9JJ43 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rbfox1Q9JJ43 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC16.4■□□□□ 0.22
Rbfox1Q9JJ43 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rbfox1Q9JJ43 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rbfox1Q9JJ43 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.22
Rbfox1Q9JJ43 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
Rbfox1Q9JJ43 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.22
Rbfox1Q9JJ43 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rbfox1Q9JJ43 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC16.39■□□□□ 0.21
Rbfox1Q9JJ43 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rbfox1Q9JJ43 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rbfox1Q9JJ43 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rbfox1Q9JJ43 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rbfox1Q9JJ43 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Rbfox1Q9JJ43 Gm10571-201ENSMUST00000097869 1638 ntBASIC16.39■□□□□ 0.21
Rbfox1Q9JJ43 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rbfox1Q9JJ43 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rbfox1Q9JJ43 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC16.39■□□□□ 0.21
Rbfox1Q9JJ43 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC16.39■□□□□ 0.21
Rbfox1Q9JJ43 Gm45102-201ENSMUST00000207427 857 ntBASIC16.39■□□□□ 0.21
Rbfox1Q9JJ43 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC16.39■□□□□ 0.21
Rbfox1Q9JJ43 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rbfox1Q9JJ43 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rbfox1Q9JJ43 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rbfox1Q9JJ43 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rbfox1Q9JJ43 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rbfox1Q9JJ43 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
Rbfox1Q9JJ43 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rbfox1Q9JJ43 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rbfox1Q9JJ43 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
Rbfox1Q9JJ43 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rbfox1Q9JJ43 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Rbfox1Q9JJ43 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rbfox1Q9JJ43 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rbfox1Q9JJ43 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rbfox1Q9JJ43 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rbfox1Q9JJ43 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rbfox1Q9JJ43 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rbfox1Q9JJ43 Gm38342-201ENSMUST00000195710 2980 ntBASIC16.38■□□□□ 0.21
Rbfox1Q9JJ43 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rbfox1Q9JJ43 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rbfox1Q9JJ43 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rbfox1Q9JJ43 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms