Protein–RNA interactions for Protein: Q9EQR4

Clca3a2, Chloride channel accessory 3A2, mousemouse

Predictions only

Length 902 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clca3a2Q9EQR4 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Clca3a2Q9EQR4 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Clca3a2Q9EQR4 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clca3a2Q9EQR4 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Clca3a2Q9EQR4 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clca3a2Q9EQR4 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clca3a2Q9EQR4 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.53■□□□□ 0.56
Clca3a2Q9EQR4 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clca3a2Q9EQR4 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clca3a2Q9EQR4 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clca3a2Q9EQR4 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clca3a2Q9EQR4 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clca3a2Q9EQR4 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Clca3a2Q9EQR4 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Clca3a2Q9EQR4 Gm26833-201ENSMUST00000180899 440 ntBASIC18.52■□□□□ 0.56
Clca3a2Q9EQR4 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Clca3a2Q9EQR4 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.52■□□□□ 0.56
Clca3a2Q9EQR4 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Clca3a2Q9EQR4 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Clca3a2Q9EQR4 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Clca3a2Q9EQR4 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Clca3a2Q9EQR4 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Clca3a2Q9EQR4 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.51■□□□□ 0.55
Clca3a2Q9EQR4 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Clca3a2Q9EQR4 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.5■□□□□ 0.55
Clca3a2Q9EQR4 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Clca3a2Q9EQR4 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Clca3a2Q9EQR4 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Clca3a2Q9EQR4 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.5■□□□□ 0.55
Clca3a2Q9EQR4 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Clca3a2Q9EQR4 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Clca3a2Q9EQR4 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Clca3a2Q9EQR4 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Clca3a2Q9EQR4 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Clca3a2Q9EQR4 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Clca3a2Q9EQR4 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.49■□□□□ 0.55
Clca3a2Q9EQR4 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Clca3a2Q9EQR4 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Clca3a2Q9EQR4 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Clca3a2Q9EQR4 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Clca3a2Q9EQR4 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Clca3a2Q9EQR4 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Clca3a2Q9EQR4 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Clca3a2Q9EQR4 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Clca3a2Q9EQR4 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Clca3a2Q9EQR4 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Clca3a2Q9EQR4 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Clca3a2Q9EQR4 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.48■□□□□ 0.55
Clca3a2Q9EQR4 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Clca3a2Q9EQR4 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Clca3a2Q9EQR4 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.48■□□□□ 0.55
Clca3a2Q9EQR4 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Clca3a2Q9EQR4 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Clca3a2Q9EQR4 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.48■□□□□ 0.55
Clca3a2Q9EQR4 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Clca3a2Q9EQR4 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Clca3a2Q9EQR4 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Clca3a2Q9EQR4 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Clca3a2Q9EQR4 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Clca3a2Q9EQR4 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.47■□□□□ 0.55
Clca3a2Q9EQR4 Gm27801-201ENSMUST00000184174 223 ntBASIC18.47■□□□□ 0.55
Clca3a2Q9EQR4 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Clca3a2Q9EQR4 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Clca3a2Q9EQR4 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.47■□□□□ 0.55
Clca3a2Q9EQR4 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Clca3a2Q9EQR4 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Clca3a2Q9EQR4 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Clca3a2Q9EQR4 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Clca3a2Q9EQR4 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Clca3a2Q9EQR4 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Clca3a2Q9EQR4 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.46■□□□□ 0.55
Clca3a2Q9EQR4 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.46■□□□□ 0.55
Clca3a2Q9EQR4 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Clca3a2Q9EQR4 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Clca3a2Q9EQR4 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Clca3a2Q9EQR4 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Clca3a2Q9EQR4 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Clca3a2Q9EQR4 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Clca3a2Q9EQR4 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Clca3a2Q9EQR4 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Clca3a2Q9EQR4 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Clca3a2Q9EQR4 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Clca3a2Q9EQR4 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Clca3a2Q9EQR4 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Clca3a2Q9EQR4 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Clca3a2Q9EQR4 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Clca3a2Q9EQR4 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.45■□□□□ 0.54
Clca3a2Q9EQR4 Golph3-202ENSMUST00000226517 2359 ntBASIC18.45■□□□□ 0.54
Clca3a2Q9EQR4 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Clca3a2Q9EQR4 Gm40848-201ENSMUST00000221998 324 ntBASIC18.45■□□□□ 0.54
Clca3a2Q9EQR4 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.45■□□□□ 0.54
Clca3a2Q9EQR4 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Clca3a2Q9EQR4 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Clca3a2Q9EQR4 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Clca3a2Q9EQR4 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Clca3a2Q9EQR4 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Clca3a2Q9EQR4 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Clca3a2Q9EQR4 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.44■□□□□ 0.54
Clca3a2Q9EQR4 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Clca3a2Q9EQR4 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms