Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vps35Q9EQH3 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Vps35Q9EQH3 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Vps35Q9EQH3 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vps35Q9EQH3 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.36■□□□□ 0.69
Vps35Q9EQH3 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vps35Q9EQH3 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Vps35Q9EQH3 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vps35Q9EQH3 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vps35Q9EQH3 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Vps35Q9EQH3 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vps35Q9EQH3 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.36■□□□□ 0.69
Vps35Q9EQH3 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.35■□□□□ 0.69
Vps35Q9EQH3 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Vps35Q9EQH3 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.35■□□□□ 0.69
Vps35Q9EQH3 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.35■□□□□ 0.69
Vps35Q9EQH3 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Vps35Q9EQH3 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Vps35Q9EQH3 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vps35Q9EQH3 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.35■□□□□ 0.69
Vps35Q9EQH3 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vps35Q9EQH3 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vps35Q9EQH3 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Vps35Q9EQH3 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vps35Q9EQH3 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vps35Q9EQH3 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
Vps35Q9EQH3 Gm26833-201ENSMUST00000180899 440 ntBASIC19.34■□□□□ 0.69
Vps35Q9EQH3 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.34■□□□□ 0.69
Vps35Q9EQH3 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.34■□□□□ 0.69
Vps35Q9EQH3 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Vps35Q9EQH3 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Vps35Q9EQH3 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
Vps35Q9EQH3 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Vps35Q9EQH3 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Vps35Q9EQH3 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Vps35Q9EQH3 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Vps35Q9EQH3 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Vps35Q9EQH3 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Vps35Q9EQH3 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Vps35Q9EQH3 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Vps35Q9EQH3 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Vps35Q9EQH3 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Vps35Q9EQH3 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vps35Q9EQH3 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Vps35Q9EQH3 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.32■□□□□ 0.68
Vps35Q9EQH3 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
Vps35Q9EQH3 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
Vps35Q9EQH3 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Vps35Q9EQH3 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Vps35Q9EQH3 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vps35Q9EQH3 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vps35Q9EQH3 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vps35Q9EQH3 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.31■□□□□ 0.68
Vps35Q9EQH3 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vps35Q9EQH3 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Vps35Q9EQH3 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vps35Q9EQH3 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.3■□□□□ 0.68
Vps35Q9EQH3 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vps35Q9EQH3 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vps35Q9EQH3 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vps35Q9EQH3 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vps35Q9EQH3 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.3■□□□□ 0.68
Vps35Q9EQH3 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Vps35Q9EQH3 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Vps35Q9EQH3 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vps35Q9EQH3 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Vps35Q9EQH3 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.29■□□□□ 0.68
Vps35Q9EQH3 Gm11421-201ENSMUST00000122124 294 ntBASIC19.29■□□□□ 0.68
Vps35Q9EQH3 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.29■□□□□ 0.68
Vps35Q9EQH3 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vps35Q9EQH3 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Vps35Q9EQH3 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vps35Q9EQH3 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vps35Q9EQH3 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Vps35Q9EQH3 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vps35Q9EQH3 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vps35Q9EQH3 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vps35Q9EQH3 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.29■□□□□ 0.68
Vps35Q9EQH3 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.29■□□□□ 0.68
Vps35Q9EQH3 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vps35Q9EQH3 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vps35Q9EQH3 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Vps35Q9EQH3 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Vps35Q9EQH3 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vps35Q9EQH3 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Vps35Q9EQH3 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Vps35Q9EQH3 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vps35Q9EQH3 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Vps35Q9EQH3 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vps35Q9EQH3 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Vps35Q9EQH3 AA386476-201ENSMUST00000098781 1665 ntBASIC19.27■□□□□ 0.68
Vps35Q9EQH3 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Vps35Q9EQH3 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Vps35Q9EQH3 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Vps35Q9EQH3 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Vps35Q9EQH3 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.27■□□□□ 0.68
Vps35Q9EQH3 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Vps35Q9EQH3 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.27■□□□□ 0.68
Vps35Q9EQH3 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Vps35Q9EQH3 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 8.5 ms