Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cpne8Q9DC53 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cpne8Q9DC53 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Cpne8Q9DC53 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cpne8Q9DC53 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cpne8Q9DC53 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cpne8Q9DC53 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cpne8Q9DC53 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cpne8Q9DC53 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cpne8Q9DC53 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Cpne8Q9DC53 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cpne8Q9DC53 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cpne8Q9DC53 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cpne8Q9DC53 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cpne8Q9DC53 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
Cpne8Q9DC53 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cpne8Q9DC53 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cpne8Q9DC53 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cpne8Q9DC53 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.23■□□□□ 0.83
Cpne8Q9DC53 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.23■□□□□ 0.83
Cpne8Q9DC53 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cpne8Q9DC53 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
Cpne8Q9DC53 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.23■□□□□ 0.83
Cpne8Q9DC53 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cpne8Q9DC53 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Cpne8Q9DC53 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Cpne8Q9DC53 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cpne8Q9DC53 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cpne8Q9DC53 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cpne8Q9DC53 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cpne8Q9DC53 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.22■□□□□ 0.83
Cpne8Q9DC53 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cpne8Q9DC53 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.22■□□□□ 0.83
Cpne8Q9DC53 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Cpne8Q9DC53 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cpne8Q9DC53 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cpne8Q9DC53 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cpne8Q9DC53 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Cpne8Q9DC53 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cpne8Q9DC53 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cpne8Q9DC53 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
Cpne8Q9DC53 Gm18688-201ENSMUST00000204695 1859 ntBASIC20.21■□□□□ 0.83
Cpne8Q9DC53 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Cpne8Q9DC53 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cpne8Q9DC53 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cpne8Q9DC53 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cpne8Q9DC53 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Cpne8Q9DC53 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cpne8Q9DC53 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cpne8Q9DC53 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cpne8Q9DC53 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.2■□□□□ 0.82
Cpne8Q9DC53 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
Cpne8Q9DC53 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cpne8Q9DC53 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cpne8Q9DC53 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cpne8Q9DC53 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cpne8Q9DC53 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.19■□□□□ 0.82
Cpne8Q9DC53 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cpne8Q9DC53 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cpne8Q9DC53 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cpne8Q9DC53 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cpne8Q9DC53 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cpne8Q9DC53 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Cpne8Q9DC53 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cpne8Q9DC53 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Cpne8Q9DC53 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Cpne8Q9DC53 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.18■□□□□ 0.82
Cpne8Q9DC53 Spcs1-204ENSMUST00000226782 949 ntBASIC20.18■□□□□ 0.82
Cpne8Q9DC53 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
Cpne8Q9DC53 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Cpne8Q9DC53 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.18■□□□□ 0.82
Cpne8Q9DC53 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Cpne8Q9DC53 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Cpne8Q9DC53 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.17■□□□□ 0.82
Cpne8Q9DC53 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cpne8Q9DC53 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cpne8Q9DC53 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Cpne8Q9DC53 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.17■□□□□ 0.82
Cpne8Q9DC53 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cpne8Q9DC53 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.17■□□□□ 0.82
Cpne8Q9DC53 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Cpne8Q9DC53 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cpne8Q9DC53 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Cpne8Q9DC53 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.17■□□□□ 0.82
Cpne8Q9DC53 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Cpne8Q9DC53 Gm38342-201ENSMUST00000195710 2980 ntBASIC20.16■□□□□ 0.82
Cpne8Q9DC53 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Cpne8Q9DC53 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cpne8Q9DC53 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cpne8Q9DC53 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cpne8Q9DC53 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cpne8Q9DC53 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cpne8Q9DC53 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Cpne8Q9DC53 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Cpne8Q9DC53 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cpne8Q9DC53 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cpne8Q9DC53 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
Cpne8Q9DC53 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cpne8Q9DC53 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cpne8Q9DC53 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms