Protein–RNA interactions for Protein: Q9DC33

Hmg20a, High mobility group protein 20A, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20aQ9DC33 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hmg20aQ9DC33 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Hmg20aQ9DC33 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Hmg20aQ9DC33 Nsd1-206ENSMUST00000224918 1001 ntBASIC17.69■□□□□ 0.42
Hmg20aQ9DC33 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hmg20aQ9DC33 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Hmg20aQ9DC33 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.68■□□□□ 0.42
Hmg20aQ9DC33 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hmg20aQ9DC33 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hmg20aQ9DC33 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hmg20aQ9DC33 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hmg20aQ9DC33 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hmg20aQ9DC33 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hmg20aQ9DC33 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hmg20aQ9DC33 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Hmg20aQ9DC33 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hmg20aQ9DC33 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hmg20aQ9DC33 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hmg20aQ9DC33 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hmg20aQ9DC33 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hmg20aQ9DC33 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hmg20aQ9DC33 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hmg20aQ9DC33 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hmg20aQ9DC33 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.67■□□□□ 0.42
Hmg20aQ9DC33 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hmg20aQ9DC33 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hmg20aQ9DC33 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hmg20aQ9DC33 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hmg20aQ9DC33 Gm7332-201ENSMUST00000118351 454 ntBASIC17.67■□□□□ 0.42
Hmg20aQ9DC33 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hmg20aQ9DC33 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.67■□□□□ 0.42
Hmg20aQ9DC33 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hmg20aQ9DC33 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hmg20aQ9DC33 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hmg20aQ9DC33 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hmg20aQ9DC33 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hmg20aQ9DC33 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hmg20aQ9DC33 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.66■□□□□ 0.42
Hmg20aQ9DC33 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hmg20aQ9DC33 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hmg20aQ9DC33 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Hmg20aQ9DC33 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC17.66■□□□□ 0.42
Hmg20aQ9DC33 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hmg20aQ9DC33 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hmg20aQ9DC33 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Hmg20aQ9DC33 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hmg20aQ9DC33 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hmg20aQ9DC33 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hmg20aQ9DC33 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hmg20aQ9DC33 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Hmg20aQ9DC33 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Hmg20aQ9DC33 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.65■□□□□ 0.42
Hmg20aQ9DC33 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.65■□□□□ 0.42
Hmg20aQ9DC33 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hmg20aQ9DC33 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC17.65■□□□□ 0.42
Hmg20aQ9DC33 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC17.65■□□□□ 0.42
Hmg20aQ9DC33 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Hmg20aQ9DC33 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.65■□□□□ 0.42
Hmg20aQ9DC33 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hmg20aQ9DC33 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hmg20aQ9DC33 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hmg20aQ9DC33 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Hmg20aQ9DC33 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hmg20aQ9DC33 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hmg20aQ9DC33 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Hmg20aQ9DC33 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
Hmg20aQ9DC33 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Hmg20aQ9DC33 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hmg20aQ9DC33 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hmg20aQ9DC33 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hmg20aQ9DC33 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hmg20aQ9DC33 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Hmg20aQ9DC33 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hmg20aQ9DC33 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hmg20aQ9DC33 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hmg20aQ9DC33 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
Hmg20aQ9DC33 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hmg20aQ9DC33 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Hmg20aQ9DC33 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Hmg20aQ9DC33 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hmg20aQ9DC33 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Hmg20aQ9DC33 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hmg20aQ9DC33 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hmg20aQ9DC33 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hmg20aQ9DC33 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hmg20aQ9DC33 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hmg20aQ9DC33 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.62■□□□□ 0.41
Hmg20aQ9DC33 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hmg20aQ9DC33 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hmg20aQ9DC33 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hmg20aQ9DC33 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hmg20aQ9DC33 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hmg20aQ9DC33 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hmg20aQ9DC33 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Hmg20aQ9DC33 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hmg20aQ9DC33 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Hmg20aQ9DC33 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hmg20aQ9DC33 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.62■□□□□ 0.41
Hmg20aQ9DC33 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Hmg20aQ9DC33 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms