Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19■□□□□ 0.63
Rrp8Q9DB85 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rrp8Q9DB85 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
Rrp8Q9DB85 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rrp8Q9DB85 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19■□□□□ 0.63
Rrp8Q9DB85 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rrp8Q9DB85 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rrp8Q9DB85 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rrp8Q9DB85 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rrp8Q9DB85 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rrp8Q9DB85 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Rrp8Q9DB85 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Rrp8Q9DB85 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.99■□□□□ 0.63
Rrp8Q9DB85 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rrp8Q9DB85 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rrp8Q9DB85 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rrp8Q9DB85 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rrp8Q9DB85 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rrp8Q9DB85 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rrp8Q9DB85 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rrp8Q9DB85 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Rrp8Q9DB85 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.99■□□□□ 0.63
Rrp8Q9DB85 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rrp8Q9DB85 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rrp8Q9DB85 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rrp8Q9DB85 AA386476-201ENSMUST00000098781 1665 ntBASIC18.98■□□□□ 0.63
Rrp8Q9DB85 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rrp8Q9DB85 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rrp8Q9DB85 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Rrp8Q9DB85 Gm12527-201ENSMUST00000117967 564 ntBASIC18.98■□□□□ 0.63
Rrp8Q9DB85 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Rrp8Q9DB85 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Rrp8Q9DB85 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Rrp8Q9DB85 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Rrp8Q9DB85 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rrp8Q9DB85 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Rrp8Q9DB85 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rrp8Q9DB85 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rrp8Q9DB85 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rrp8Q9DB85 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Rrp8Q9DB85 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.97■□□□□ 0.63
Rrp8Q9DB85 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Rrp8Q9DB85 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rrp8Q9DB85 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rrp8Q9DB85 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.97■□□□□ 0.63
Rrp8Q9DB85 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rrp8Q9DB85 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Rrp8Q9DB85 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rrp8Q9DB85 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Rrp8Q9DB85 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rrp8Q9DB85 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.96■□□□□ 0.63
Rrp8Q9DB85 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rrp8Q9DB85 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rrp8Q9DB85 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Rrp8Q9DB85 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Rrp8Q9DB85 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rrp8Q9DB85 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Rrp8Q9DB85 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rrp8Q9DB85 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Rrp8Q9DB85 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Rrp8Q9DB85 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rrp8Q9DB85 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rrp8Q9DB85 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rrp8Q9DB85 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rrp8Q9DB85 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rrp8Q9DB85 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rrp8Q9DB85 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rrp8Q9DB85 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rrp8Q9DB85 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rrp8Q9DB85 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.95■□□□□ 0.62
Rrp8Q9DB85 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rrp8Q9DB85 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rrp8Q9DB85 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Rrp8Q9DB85 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rrp8Q9DB85 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rrp8Q9DB85 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Rrp8Q9DB85 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rrp8Q9DB85 Gm13534-201ENSMUST00000121169 513 ntBASIC18.95■□□□□ 0.62
Rrp8Q9DB85 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Rrp8Q9DB85 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.95■□□□□ 0.62
Rrp8Q9DB85 Gm6211-202ENSMUST00000167849 925 ntBASIC18.95■□□□□ 0.62
Rrp8Q9DB85 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC18.95■□□□□ 0.62
Rrp8Q9DB85 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rrp8Q9DB85 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Rrp8Q9DB85 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rrp8Q9DB85 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rrp8Q9DB85 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rrp8Q9DB85 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rrp8Q9DB85 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.94■□□□□ 0.62
Rrp8Q9DB85 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Rrp8Q9DB85 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rrp8Q9DB85 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rrp8Q9DB85 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Rrp8Q9DB85 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.94■□□□□ 0.62
Rrp8Q9DB85 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.94■□□□□ 0.62
Rrp8Q9DB85 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rrp8Q9DB85 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rrp8Q9DB85 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Rrp8Q9DB85 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rrp8Q9DB85 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms