Protein–RNA interactions for Protein: Q9DA19

Cir1, Corepressor interacting with RBPJ 1, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cir1Q9DA19 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cir1Q9DA19 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Cir1Q9DA19 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Cir1Q9DA19 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cir1Q9DA19 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cir1Q9DA19 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cir1Q9DA19 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cir1Q9DA19 AC158990.1-201ENSMUST00000221450 2016 ntBASIC16.75■□□□□ 0.27
Cir1Q9DA19 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cir1Q9DA19 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cir1Q9DA19 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Cir1Q9DA19 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC16.75■□□□□ 0.27
Cir1Q9DA19 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cir1Q9DA19 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cir1Q9DA19 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cir1Q9DA19 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cir1Q9DA19 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Cir1Q9DA19 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cir1Q9DA19 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cir1Q9DA19 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cir1Q9DA19 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cir1Q9DA19 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC16.74■□□□□ 0.27
Cir1Q9DA19 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cir1Q9DA19 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Cir1Q9DA19 Gm11847-201ENSMUST00000125165 1119 ntBASIC16.74■□□□□ 0.27
Cir1Q9DA19 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Cir1Q9DA19 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cir1Q9DA19 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC16.74■□□□□ 0.27
Cir1Q9DA19 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
Cir1Q9DA19 AC122428.2-201ENSMUST00000216321 1832 ntBASIC16.74■□□□□ 0.27
Cir1Q9DA19 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cir1Q9DA19 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cir1Q9DA19 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cir1Q9DA19 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cir1Q9DA19 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cir1Q9DA19 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cir1Q9DA19 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC16.73■□□□□ 0.27
Cir1Q9DA19 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cir1Q9DA19 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cir1Q9DA19 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cir1Q9DA19 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC16.73■□□□□ 0.27
Cir1Q9DA19 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cir1Q9DA19 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cir1Q9DA19 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC16.73■□□□□ 0.27
Cir1Q9DA19 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cir1Q9DA19 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cir1Q9DA19 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cir1Q9DA19 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cir1Q9DA19 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cir1Q9DA19 Gm5784-201ENSMUST00000179344 2478 ntBASIC16.73■□□□□ 0.27
Cir1Q9DA19 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cir1Q9DA19 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Cir1Q9DA19 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cir1Q9DA19 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC16.72■□□□□ 0.27
Cir1Q9DA19 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cir1Q9DA19 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cir1Q9DA19 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cir1Q9DA19 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cir1Q9DA19 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cir1Q9DA19 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.72■□□□□ 0.27
Cir1Q9DA19 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cir1Q9DA19 Gm12821-201ENSMUST00000120022 600 ntBASIC16.72■□□□□ 0.27
Cir1Q9DA19 Gm21956-201ENSMUST00000179946 522 ntBASIC16.72■□□□□ 0.27
Cir1Q9DA19 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC16.72■□□□□ 0.27
Cir1Q9DA19 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cir1Q9DA19 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cir1Q9DA19 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cir1Q9DA19 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Cir1Q9DA19 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cir1Q9DA19 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cir1Q9DA19 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cir1Q9DA19 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cir1Q9DA19 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cir1Q9DA19 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cir1Q9DA19 Appbp2os-202ENSMUST00000206972 447 ntBASIC16.71■□□□□ 0.27
Cir1Q9DA19 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC16.71■□□□□ 0.27
Cir1Q9DA19 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC16.71■□□□□ 0.27
Cir1Q9DA19 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cir1Q9DA19 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cir1Q9DA19 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cir1Q9DA19 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cir1Q9DA19 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cir1Q9DA19 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Cir1Q9DA19 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Cir1Q9DA19 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.7■□□□□ 0.26
Cir1Q9DA19 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cir1Q9DA19 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cir1Q9DA19 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cir1Q9DA19 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cir1Q9DA19 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC16.7■□□□□ 0.26
Cir1Q9DA19 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cir1Q9DA19 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Cir1Q9DA19 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
Cir1Q9DA19 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cir1Q9DA19 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cir1Q9DA19 Rarb-207ENSMUST00000225921 2756 ntBASIC16.7■□□□□ 0.26
Cir1Q9DA19 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cir1Q9DA19 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cir1Q9DA19 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cir1Q9DA19 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms