Protein–RNA interactions for Protein: Q9D8B4

Ndufa11, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11, mousemouse

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa11Q9D8B4 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Ndufa11Q9D8B4 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC16.83■□□□□ 0.28
Ndufa11Q9D8B4 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ndufa11Q9D8B4 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ndufa11Q9D8B4 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ndufa11Q9D8B4 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC16.83■□□□□ 0.28
Ndufa11Q9D8B4 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC16.83■□□□□ 0.28
Ndufa11Q9D8B4 Gm7977-201ENSMUST00000193787 748 ntBASIC16.83■□□□□ 0.28
Ndufa11Q9D8B4 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC16.83■□□□□ 0.28
Ndufa11Q9D8B4 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC16.83■□□□□ 0.28
Ndufa11Q9D8B4 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ndufa11Q9D8B4 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Ndufa11Q9D8B4 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC16.83■□□□□ 0.28
Ndufa11Q9D8B4 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ndufa11Q9D8B4 Gm15043-201ENSMUST00000118843 1543 ntBASIC16.82■□□□□ 0.28
Ndufa11Q9D8B4 Gm37563-201ENSMUST00000192580 1513 ntBASIC16.82■□□□□ 0.28
Ndufa11Q9D8B4 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Ndufa11Q9D8B4 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ndufa11Q9D8B4 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ndufa11Q9D8B4 Gm7860-201ENSMUST00000121190 879 ntBASIC16.82■□□□□ 0.28
Ndufa11Q9D8B4 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC16.82■□□□□ 0.28
Ndufa11Q9D8B4 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC16.82■□□□□ 0.28
Ndufa11Q9D8B4 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.82■□□□□ 0.28
Ndufa11Q9D8B4 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Ndufa11Q9D8B4 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ndufa11Q9D8B4 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ndufa11Q9D8B4 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ndufa11Q9D8B4 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Ndufa11Q9D8B4 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ndufa11Q9D8B4 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ndufa11Q9D8B4 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC16.82■□□□□ 0.28
Ndufa11Q9D8B4 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ndufa11Q9D8B4 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ndufa11Q9D8B4 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ndufa11Q9D8B4 AC131586.2-201ENSMUST00000228370 1512 ntBASIC16.81■□□□□ 0.28
Ndufa11Q9D8B4 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ndufa11Q9D8B4 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ndufa11Q9D8B4 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Ndufa11Q9D8B4 Gm27275-201ENSMUST00000184318 272 ntBASIC16.81■□□□□ 0.28
Ndufa11Q9D8B4 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC16.81■□□□□ 0.28
Ndufa11Q9D8B4 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ndufa11Q9D8B4 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ndufa11Q9D8B4 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ndufa11Q9D8B4 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ndufa11Q9D8B4 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ndufa11Q9D8B4 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Ndufa11Q9D8B4 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ndufa11Q9D8B4 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ndufa11Q9D8B4 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ndufa11Q9D8B4 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ndufa11Q9D8B4 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ndufa11Q9D8B4 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ndufa11Q9D8B4 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ndufa11Q9D8B4 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ndufa11Q9D8B4 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ndufa11Q9D8B4 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ndufa11Q9D8B4 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ndufa11Q9D8B4 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ndufa11Q9D8B4 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Ndufa11Q9D8B4 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ndufa11Q9D8B4 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC16.79■□□□□ 0.28
Ndufa11Q9D8B4 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ndufa11Q9D8B4 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ndufa11Q9D8B4 Gm43909-201ENSMUST00000203443 1876 ntBASIC16.79■□□□□ 0.28
Ndufa11Q9D8B4 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ndufa11Q9D8B4 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
Ndufa11Q9D8B4 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC16.78■□□□□ 0.28
Ndufa11Q9D8B4 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Ndufa11Q9D8B4 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ndufa11Q9D8B4 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Ndufa11Q9D8B4 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ndufa11Q9D8B4 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ndufa11Q9D8B4 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Ndufa11Q9D8B4 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC16.78■□□□□ 0.28
Ndufa11Q9D8B4 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ndufa11Q9D8B4 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ndufa11Q9D8B4 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ndufa11Q9D8B4 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Ndufa11Q9D8B4 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Ndufa11Q9D8B4 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ndufa11Q9D8B4 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ndufa11Q9D8B4 Gm12896-201ENSMUST00000118430 226 ntBASIC16.77■□□□□ 0.28
Ndufa11Q9D8B4 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ndufa11Q9D8B4 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
Ndufa11Q9D8B4 Gm6576-201ENSMUST00000169678 883 ntBASIC16.77■□□□□ 0.28
Ndufa11Q9D8B4 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC16.77■□□□□ 0.28
Ndufa11Q9D8B4 Gm27032-201ENSMUST00000183124 1116 ntBASIC16.77■□□□□ 0.28
Ndufa11Q9D8B4 Arhgef33-211ENSMUST00000225658 473 ntBASIC16.77■□□□□ 0.28
Ndufa11Q9D8B4 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ndufa11Q9D8B4 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ndufa11Q9D8B4 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ndufa11Q9D8B4 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ndufa11Q9D8B4 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ndufa11Q9D8B4 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ndufa11Q9D8B4 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ndufa11Q9D8B4 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ndufa11Q9D8B4 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ndufa11Q9D8B4 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Ndufa11Q9D8B4 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ndufa11Q9D8B4 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms