Protein–RNA interactions for Protein: Q9D7V1

Sh2d4a, SH2 domain-containing protein 4A, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4aQ9D7V1 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sh2d4aQ9D7V1 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.71■□□□□ 0.59
Sh2d4aQ9D7V1 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sh2d4aQ9D7V1 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Sh2d4aQ9D7V1 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Sh2d4aQ9D7V1 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sh2d4aQ9D7V1 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Sh2d4aQ9D7V1 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sh2d4aQ9D7V1 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sh2d4aQ9D7V1 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Sh2d4aQ9D7V1 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
Sh2d4aQ9D7V1 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sh2d4aQ9D7V1 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sh2d4aQ9D7V1 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sh2d4aQ9D7V1 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sh2d4aQ9D7V1 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sh2d4aQ9D7V1 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sh2d4aQ9D7V1 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sh2d4aQ9D7V1 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sh2d4aQ9D7V1 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.69■□□□□ 0.58
Sh2d4aQ9D7V1 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sh2d4aQ9D7V1 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Sh2d4aQ9D7V1 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.69■□□□□ 0.58
Sh2d4aQ9D7V1 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sh2d4aQ9D7V1 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sh2d4aQ9D7V1 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sh2d4aQ9D7V1 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Sh2d4aQ9D7V1 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Sh2d4aQ9D7V1 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sh2d4aQ9D7V1 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Sh2d4aQ9D7V1 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sh2d4aQ9D7V1 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sh2d4aQ9D7V1 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sh2d4aQ9D7V1 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC18.68■□□□□ 0.58
Sh2d4aQ9D7V1 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.68■□□□□ 0.58
Sh2d4aQ9D7V1 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Sh2d4aQ9D7V1 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Sh2d4aQ9D7V1 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sh2d4aQ9D7V1 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sh2d4aQ9D7V1 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Sh2d4aQ9D7V1 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sh2d4aQ9D7V1 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
Sh2d4aQ9D7V1 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Sh2d4aQ9D7V1 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.67■□□□□ 0.58
Sh2d4aQ9D7V1 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Sh2d4aQ9D7V1 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.67■□□□□ 0.58
Sh2d4aQ9D7V1 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.67■□□□□ 0.58
Sh2d4aQ9D7V1 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sh2d4aQ9D7V1 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sh2d4aQ9D7V1 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.67■□□□□ 0.58
Sh2d4aQ9D7V1 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sh2d4aQ9D7V1 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sh2d4aQ9D7V1 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sh2d4aQ9D7V1 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sh2d4aQ9D7V1 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sh2d4aQ9D7V1 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sh2d4aQ9D7V1 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Sh2d4aQ9D7V1 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sh2d4aQ9D7V1 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sh2d4aQ9D7V1 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.66■□□□□ 0.58
Sh2d4aQ9D7V1 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sh2d4aQ9D7V1 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sh2d4aQ9D7V1 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Sh2d4aQ9D7V1 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sh2d4aQ9D7V1 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sh2d4aQ9D7V1 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sh2d4aQ9D7V1 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sh2d4aQ9D7V1 Golph3-205ENSMUST00000228671 2842 ntBASIC18.65■□□□□ 0.58
Sh2d4aQ9D7V1 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Sh2d4aQ9D7V1 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Sh2d4aQ9D7V1 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
Sh2d4aQ9D7V1 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sh2d4aQ9D7V1 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.65■□□□□ 0.58
Sh2d4aQ9D7V1 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sh2d4aQ9D7V1 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sh2d4aQ9D7V1 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.65■□□□□ 0.58
Sh2d4aQ9D7V1 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
Sh2d4aQ9D7V1 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sh2d4aQ9D7V1 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sh2d4aQ9D7V1 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.64■□□□□ 0.57
Sh2d4aQ9D7V1 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.64■□□□□ 0.57
Sh2d4aQ9D7V1 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sh2d4aQ9D7V1 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Sh2d4aQ9D7V1 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.64■□□□□ 0.57
Sh2d4aQ9D7V1 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.64■□□□□ 0.57
Sh2d4aQ9D7V1 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Sh2d4aQ9D7V1 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sh2d4aQ9D7V1 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
Sh2d4aQ9D7V1 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sh2d4aQ9D7V1 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sh2d4aQ9D7V1 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sh2d4aQ9D7V1 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Sh2d4aQ9D7V1 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sh2d4aQ9D7V1 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sh2d4aQ9D7V1 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sh2d4aQ9D7V1 Gm42501-201ENSMUST00000200220 1026 ntBASIC18.63■□□□□ 0.57
Sh2d4aQ9D7V1 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sh2d4aQ9D7V1 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sh2d4aQ9D7V1 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sh2d4aQ9D7V1 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 72.9 ms