Protein–RNA interactions for Protein: Q9D3I8

Rhox4a, Reproductive homeobox 4A, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhox4aQ9D3I8 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC16.06■□□□□ 0.16
Rhox4aQ9D3I8 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC16.06■□□□□ 0.16
Rhox4aQ9D3I8 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC16.06■□□□□ 0.16
Rhox4aQ9D3I8 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rhox4aQ9D3I8 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rhox4aQ9D3I8 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Rhox4aQ9D3I8 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rhox4aQ9D3I8 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rhox4aQ9D3I8 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rhox4aQ9D3I8 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rhox4aQ9D3I8 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rhox4aQ9D3I8 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rhox4aQ9D3I8 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Rhox4aQ9D3I8 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rhox4aQ9D3I8 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.05■□□□□ 0.16
Rhox4aQ9D3I8 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rhox4aQ9D3I8 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rhox4aQ9D3I8 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rhox4aQ9D3I8 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rhox4aQ9D3I8 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rhox4aQ9D3I8 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rhox4aQ9D3I8 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rhox4aQ9D3I8 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rhox4aQ9D3I8 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.05■□□□□ 0.16
Rhox4aQ9D3I8 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rhox4aQ9D3I8 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rhox4aQ9D3I8 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Rhox4aQ9D3I8 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rhox4aQ9D3I8 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rhox4aQ9D3I8 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rhox4aQ9D3I8 Gm37035-201ENSMUST00000194809 2148 ntBASIC16.04■□□□□ 0.16
Rhox4aQ9D3I8 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rhox4aQ9D3I8 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC16.04■□□□□ 0.16
Rhox4aQ9D3I8 AC122428.2-201ENSMUST00000216321 1832 ntBASIC16.04■□□□□ 0.16
Rhox4aQ9D3I8 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Rhox4aQ9D3I8 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Rhox4aQ9D3I8 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rhox4aQ9D3I8 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rhox4aQ9D3I8 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rhox4aQ9D3I8 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rhox4aQ9D3I8 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rhox4aQ9D3I8 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rhox4aQ9D3I8 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rhox4aQ9D3I8 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rhox4aQ9D3I8 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rhox4aQ9D3I8 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rhox4aQ9D3I8 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rhox4aQ9D3I8 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC16.04■□□□□ 0.16
Rhox4aQ9D3I8 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rhox4aQ9D3I8 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Rhox4aQ9D3I8 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rhox4aQ9D3I8 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Rhox4aQ9D3I8 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.03■□□□□ 0.16
Rhox4aQ9D3I8 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Rhox4aQ9D3I8 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC16.03■□□□□ 0.16
Rhox4aQ9D3I8 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rhox4aQ9D3I8 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rhox4aQ9D3I8 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rhox4aQ9D3I8 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rhox4aQ9D3I8 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC16.02■□□□□ 0.16
Rhox4aQ9D3I8 Mir6538-201ENSMUST00000183713 110 ntBASIC16.02■□□□□ 0.16
Rhox4aQ9D3I8 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rhox4aQ9D3I8 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rhox4aQ9D3I8 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rhox4aQ9D3I8 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rhox4aQ9D3I8 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rhox4aQ9D3I8 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rhox4aQ9D3I8 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rhox4aQ9D3I8 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rhox4aQ9D3I8 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Rhox4aQ9D3I8 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rhox4aQ9D3I8 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC16.01■□□□□ 0.15
Rhox4aQ9D3I8 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Rhox4aQ9D3I8 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rhox4aQ9D3I8 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Rhox4aQ9D3I8 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Rhox4aQ9D3I8 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rhox4aQ9D3I8 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rhox4aQ9D3I8 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rhox4aQ9D3I8 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rhox4aQ9D3I8 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Rhox4aQ9D3I8 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rhox4aQ9D3I8 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rhox4aQ9D3I8 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Rhox4aQ9D3I8 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Rhox4aQ9D3I8 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rhox4aQ9D3I8 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Rhox4aQ9D3I8 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Rhox4aQ9D3I8 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rhox4aQ9D3I8 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Rhox4aQ9D3I8 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rhox4aQ9D3I8 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rhox4aQ9D3I8 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rhox4aQ9D3I8 Gm35558-201ENSMUST00000222675 2219 ntBASIC16■□□□□ 0.15
Rhox4aQ9D3I8 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Rhox4aQ9D3I8 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Rhox4aQ9D3I8 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16■□□□□ 0.15
Rhox4aQ9D3I8 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rhox4aQ9D3I8 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rhox4aQ9D3I8 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms