Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Snf8Q9CZ28 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Snf8Q9CZ28 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Snf8Q9CZ28 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.9■□□□□ 0.78
Snf8Q9CZ28 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Snf8Q9CZ28 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Snf8Q9CZ28 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Snf8Q9CZ28 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.9■□□□□ 0.78
Snf8Q9CZ28 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Snf8Q9CZ28 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Snf8Q9CZ28 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Snf8Q9CZ28 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.78
Snf8Q9CZ28 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Snf8Q9CZ28 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Snf8Q9CZ28 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Snf8Q9CZ28 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Snf8Q9CZ28 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.89■□□□□ 0.77
Snf8Q9CZ28 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Snf8Q9CZ28 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Snf8Q9CZ28 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Snf8Q9CZ28 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Snf8Q9CZ28 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Snf8Q9CZ28 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Snf8Q9CZ28 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Snf8Q9CZ28 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Snf8Q9CZ28 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Snf8Q9CZ28 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Snf8Q9CZ28 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
Snf8Q9CZ28 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.88■□□□□ 0.77
Snf8Q9CZ28 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.88■□□□□ 0.77
Snf8Q9CZ28 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Snf8Q9CZ28 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Snf8Q9CZ28 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Snf8Q9CZ28 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Snf8Q9CZ28 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Snf8Q9CZ28 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Snf8Q9CZ28 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.88■□□□□ 0.77
Snf8Q9CZ28 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
Snf8Q9CZ28 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Snf8Q9CZ28 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Snf8Q9CZ28 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Snf8Q9CZ28 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Snf8Q9CZ28 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Snf8Q9CZ28 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.87■□□□□ 0.77
Snf8Q9CZ28 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Snf8Q9CZ28 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Snf8Q9CZ28 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.87■□□□□ 0.77
Snf8Q9CZ28 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Snf8Q9CZ28 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Snf8Q9CZ28 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Snf8Q9CZ28 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Snf8Q9CZ28 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.87■□□□□ 0.77
Snf8Q9CZ28 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Snf8Q9CZ28 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Snf8Q9CZ28 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Snf8Q9CZ28 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Snf8Q9CZ28 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Snf8Q9CZ28 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Snf8Q9CZ28 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Snf8Q9CZ28 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Snf8Q9CZ28 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Snf8Q9CZ28 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.86■□□□□ 0.77
Snf8Q9CZ28 AC093043.1-201ENSMUST00000226700 898 ntBASIC19.86■□□□□ 0.77
Snf8Q9CZ28 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Snf8Q9CZ28 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Snf8Q9CZ28 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Snf8Q9CZ28 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.85■□□□□ 0.77
Snf8Q9CZ28 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.85■□□□□ 0.77
Snf8Q9CZ28 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Snf8Q9CZ28 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Snf8Q9CZ28 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Snf8Q9CZ28 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Snf8Q9CZ28 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.85■□□□□ 0.77
Snf8Q9CZ28 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.85■□□□□ 0.77
Snf8Q9CZ28 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Snf8Q9CZ28 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Snf8Q9CZ28 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Snf8Q9CZ28 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Snf8Q9CZ28 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Snf8Q9CZ28 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Snf8Q9CZ28 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Snf8Q9CZ28 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Snf8Q9CZ28 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.84■□□□□ 0.77
Snf8Q9CZ28 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Snf8Q9CZ28 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Snf8Q9CZ28 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Snf8Q9CZ28 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Snf8Q9CZ28 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Snf8Q9CZ28 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Snf8Q9CZ28 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Snf8Q9CZ28 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
Snf8Q9CZ28 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
Snf8Q9CZ28 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Snf8Q9CZ28 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Snf8Q9CZ28 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Snf8Q9CZ28 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Snf8Q9CZ28 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
Snf8Q9CZ28 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.83■□□□□ 0.77
Snf8Q9CZ28 Gm9959-201ENSMUST00000068277 390 ntBASIC19.83■□□□□ 0.77
Snf8Q9CZ28 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms