Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Ssu72Q9CY97 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Ssu72Q9CY97 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Ssu72Q9CY97 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ssu72Q9CY97 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ssu72Q9CY97 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ssu72Q9CY97 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Ssu72Q9CY97 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ssu72Q9CY97 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ssu72Q9CY97 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ssu72Q9CY97 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ssu72Q9CY97 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ssu72Q9CY97 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ssu72Q9CY97 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ssu72Q9CY97 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.28■□□□□ 0.68
Ssu72Q9CY97 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.28■□□□□ 0.68
Ssu72Q9CY97 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ssu72Q9CY97 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.28■□□□□ 0.68
Ssu72Q9CY97 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ssu72Q9CY97 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ssu72Q9CY97 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ssu72Q9CY97 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ssu72Q9CY97 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ssu72Q9CY97 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ssu72Q9CY97 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ssu72Q9CY97 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ssu72Q9CY97 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.27■□□□□ 0.68
Ssu72Q9CY97 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.27■□□□□ 0.68
Ssu72Q9CY97 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ssu72Q9CY97 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.27■□□□□ 0.68
Ssu72Q9CY97 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.27■□□□□ 0.68
Ssu72Q9CY97 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ssu72Q9CY97 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Ssu72Q9CY97 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ssu72Q9CY97 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ssu72Q9CY97 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
Ssu72Q9CY97 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Ssu72Q9CY97 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ssu72Q9CY97 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ssu72Q9CY97 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ssu72Q9CY97 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ssu72Q9CY97 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ssu72Q9CY97 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ssu72Q9CY97 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ssu72Q9CY97 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
Ssu72Q9CY97 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ssu72Q9CY97 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ssu72Q9CY97 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ssu72Q9CY97 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ssu72Q9CY97 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ssu72Q9CY97 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Ssu72Q9CY97 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ssu72Q9CY97 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ssu72Q9CY97 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.25■□□□□ 0.67
Ssu72Q9CY97 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ssu72Q9CY97 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ssu72Q9CY97 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Ssu72Q9CY97 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ssu72Q9CY97 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ssu72Q9CY97 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ssu72Q9CY97 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.24■□□□□ 0.67
Ssu72Q9CY97 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.24■□□□□ 0.67
Ssu72Q9CY97 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ssu72Q9CY97 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ssu72Q9CY97 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ssu72Q9CY97 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.24■□□□□ 0.67
Ssu72Q9CY97 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ssu72Q9CY97 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ssu72Q9CY97 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ssu72Q9CY97 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.23■□□□□ 0.67
Ssu72Q9CY97 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ssu72Q9CY97 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.23■□□□□ 0.67
Ssu72Q9CY97 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.23■□□□□ 0.67
Ssu72Q9CY97 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ssu72Q9CY97 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.23■□□□□ 0.67
Ssu72Q9CY97 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ssu72Q9CY97 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ssu72Q9CY97 Cap2-205ENSMUST00000225824 1634 ntBASIC19.22■□□□□ 0.67
Ssu72Q9CY97 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ssu72Q9CY97 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Ssu72Q9CY97 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.22■□□□□ 0.67
Ssu72Q9CY97 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ssu72Q9CY97 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.22■□□□□ 0.67
Ssu72Q9CY97 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Ssu72Q9CY97 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ssu72Q9CY97 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
Ssu72Q9CY97 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ssu72Q9CY97 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ssu72Q9CY97 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ssu72Q9CY97 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ssu72Q9CY97 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ssu72Q9CY97 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ssu72Q9CY97 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Ssu72Q9CY97 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.21■□□□□ 0.67
Ssu72Q9CY97 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Ssu72Q9CY97 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ssu72Q9CY97 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.21■□□□□ 0.67
Ssu72Q9CY97 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ssu72Q9CY97 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ssu72Q9CY97 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms