Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Ddx47Q9CWX9 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ddx47Q9CWX9 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Ddx47Q9CWX9 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ddx47Q9CWX9 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.93■□□□□ 0.78
Ddx47Q9CWX9 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ddx47Q9CWX9 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ddx47Q9CWX9 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ddx47Q9CWX9 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ddx47Q9CWX9 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ddx47Q9CWX9 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ddx47Q9CWX9 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ddx47Q9CWX9 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ddx47Q9CWX9 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ddx47Q9CWX9 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ddx47Q9CWX9 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Ddx47Q9CWX9 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ddx47Q9CWX9 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ddx47Q9CWX9 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ddx47Q9CWX9 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx47Q9CWX9 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx47Q9CWX9 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx47Q9CWX9 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC19.91■□□□□ 0.78
Ddx47Q9CWX9 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.91■□□□□ 0.78
Ddx47Q9CWX9 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx47Q9CWX9 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx47Q9CWX9 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx47Q9CWX9 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx47Q9CWX9 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx47Q9CWX9 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx47Q9CWX9 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.91■□□□□ 0.78
Ddx47Q9CWX9 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.91■□□□□ 0.78
Ddx47Q9CWX9 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx47Q9CWX9 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx47Q9CWX9 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.9■□□□□ 0.78
Ddx47Q9CWX9 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx47Q9CWX9 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Ddx47Q9CWX9 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx47Q9CWX9 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.9■□□□□ 0.78
Ddx47Q9CWX9 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx47Q9CWX9 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx47Q9CWX9 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.9■□□□□ 0.78
Ddx47Q9CWX9 Gm10399-202ENSMUST00000202768 748 ntBASIC19.9■□□□□ 0.78
Ddx47Q9CWX9 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.9■□□□□ 0.78
Ddx47Q9CWX9 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx47Q9CWX9 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx47Q9CWX9 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx47Q9CWX9 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx47Q9CWX9 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx47Q9CWX9 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx47Q9CWX9 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx47Q9CWX9 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.78
Ddx47Q9CWX9 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Ddx47Q9CWX9 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.78
Ddx47Q9CWX9 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ddx47Q9CWX9 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ddx47Q9CWX9 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ddx47Q9CWX9 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ddx47Q9CWX9 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ddx47Q9CWX9 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.89■□□□□ 0.77
Ddx47Q9CWX9 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.89■□□□□ 0.77
Ddx47Q9CWX9 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ddx47Q9CWX9 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ddx47Q9CWX9 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ddx47Q9CWX9 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ddx47Q9CWX9 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ddx47Q9CWX9 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ddx47Q9CWX9 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ddx47Q9CWX9 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ddx47Q9CWX9 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ddx47Q9CWX9 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ddx47Q9CWX9 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ddx47Q9CWX9 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Ddx47Q9CWX9 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ddx47Q9CWX9 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Ddx47Q9CWX9 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ddx47Q9CWX9 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ddx47Q9CWX9 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ddx47Q9CWX9 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Ddx47Q9CWX9 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ddx47Q9CWX9 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ddx47Q9CWX9 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ddx47Q9CWX9 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Ddx47Q9CWX9 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ddx47Q9CWX9 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ddx47Q9CWX9 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Ddx47Q9CWX9 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ddx47Q9CWX9 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ddx47Q9CWX9 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ddx47Q9CWX9 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ddx47Q9CWX9 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ddx47Q9CWX9 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC19.86■□□□□ 0.77
Ddx47Q9CWX9 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Ddx47Q9CWX9 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ddx47Q9CWX9 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ddx47Q9CWX9 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.86■□□□□ 0.77
Ddx47Q9CWX9 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
Ddx47Q9CWX9 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ddx47Q9CWX9 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ddx47Q9CWX9 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms