Protein–RNA interactions for Protein: Q9CWM4

Pfdn1, Prefoldin subunit 1, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn1Q9CWM4 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pfdn1Q9CWM4 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Pfdn1Q9CWM4 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.09■□□□□ 0.33
Pfdn1Q9CWM4 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pfdn1Q9CWM4 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Pfdn1Q9CWM4 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pfdn1Q9CWM4 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pfdn1Q9CWM4 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pfdn1Q9CWM4 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pfdn1Q9CWM4 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pfdn1Q9CWM4 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC17.09■□□□□ 0.33
Pfdn1Q9CWM4 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pfdn1Q9CWM4 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Pfdn1Q9CWM4 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pfdn1Q9CWM4 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pfdn1Q9CWM4 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pfdn1Q9CWM4 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pfdn1Q9CWM4 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pfdn1Q9CWM4 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Pfdn1Q9CWM4 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pfdn1Q9CWM4 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Pfdn1Q9CWM4 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pfdn1Q9CWM4 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pfdn1Q9CWM4 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pfdn1Q9CWM4 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pfdn1Q9CWM4 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pfdn1Q9CWM4 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC17.08■□□□□ 0.32
Pfdn1Q9CWM4 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pfdn1Q9CWM4 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.08■□□□□ 0.32
Pfdn1Q9CWM4 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Pfdn1Q9CWM4 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Pfdn1Q9CWM4 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Pfdn1Q9CWM4 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pfdn1Q9CWM4 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pfdn1Q9CWM4 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pfdn1Q9CWM4 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pfdn1Q9CWM4 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pfdn1Q9CWM4 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pfdn1Q9CWM4 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pfdn1Q9CWM4 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pfdn1Q9CWM4 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pfdn1Q9CWM4 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pfdn1Q9CWM4 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pfdn1Q9CWM4 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Pfdn1Q9CWM4 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pfdn1Q9CWM4 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Pfdn1Q9CWM4 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pfdn1Q9CWM4 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pfdn1Q9CWM4 Gm12818-201ENSMUST00000117562 1349 ntBASIC17.06■□□□□ 0.32
Pfdn1Q9CWM4 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Pfdn1Q9CWM4 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
Pfdn1Q9CWM4 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pfdn1Q9CWM4 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pfdn1Q9CWM4 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pfdn1Q9CWM4 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pfdn1Q9CWM4 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pfdn1Q9CWM4 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pfdn1Q9CWM4 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Pfdn1Q9CWM4 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pfdn1Q9CWM4 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pfdn1Q9CWM4 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pfdn1Q9CWM4 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC17.05■□□□□ 0.32
Pfdn1Q9CWM4 AC131739.1-201ENSMUST00000221692 1245 ntBASIC17.05■□□□□ 0.32
Pfdn1Q9CWM4 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pfdn1Q9CWM4 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pfdn1Q9CWM4 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pfdn1Q9CWM4 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pfdn1Q9CWM4 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Pfdn1Q9CWM4 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pfdn1Q9CWM4 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pfdn1Q9CWM4 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pfdn1Q9CWM4 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.04■□□□□ 0.32
Pfdn1Q9CWM4 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pfdn1Q9CWM4 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pfdn1Q9CWM4 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Pfdn1Q9CWM4 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC17.04■□□□□ 0.32
Pfdn1Q9CWM4 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pfdn1Q9CWM4 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pfdn1Q9CWM4 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pfdn1Q9CWM4 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pfdn1Q9CWM4 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pfdn1Q9CWM4 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pfdn1Q9CWM4 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pfdn1Q9CWM4 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pfdn1Q9CWM4 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pfdn1Q9CWM4 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Pfdn1Q9CWM4 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pfdn1Q9CWM4 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pfdn1Q9CWM4 Mir3960-201ENSMUST00000198213 73 ntBASIC17.03■□□□□ 0.32
Pfdn1Q9CWM4 Gm42809-201ENSMUST00000198429 1138 ntBASIC17.03■□□□□ 0.32
Pfdn1Q9CWM4 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pfdn1Q9CWM4 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pfdn1Q9CWM4 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pfdn1Q9CWM4 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pfdn1Q9CWM4 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pfdn1Q9CWM4 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.03■□□□□ 0.32
Pfdn1Q9CWM4 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Pfdn1Q9CWM4 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pfdn1Q9CWM4 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pfdn1Q9CWM4 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms