Protein–RNA interactions for Protein: Q9CR09

Ufc1, Ubiquitin-fold modifier-conjugating enzyme 1, mousemouse

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ufc1Q9CR09 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ufc1Q9CR09 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Ufc1Q9CR09 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ufc1Q9CR09 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Ufc1Q9CR09 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ufc1Q9CR09 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ufc1Q9CR09 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ufc1Q9CR09 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ufc1Q9CR09 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC15.22■□□□□ 0.03
Ufc1Q9CR09 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ufc1Q9CR09 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ufc1Q9CR09 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC15.22■□□□□ 0.03
Ufc1Q9CR09 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ufc1Q9CR09 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Ufc1Q9CR09 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ufc1Q9CR09 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ufc1Q9CR09 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ufc1Q9CR09 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ufc1Q9CR09 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ufc1Q9CR09 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ufc1Q9CR09 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Ufc1Q9CR09 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Ufc1Q9CR09 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ufc1Q9CR09 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Ufc1Q9CR09 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ufc1Q9CR09 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ufc1Q9CR09 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Ufc1Q9CR09 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ufc1Q9CR09 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ufc1Q9CR09 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ufc1Q9CR09 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ufc1Q9CR09 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ufc1Q9CR09 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ufc1Q9CR09 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ufc1Q9CR09 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ufc1Q9CR09 Gm43034-201ENSMUST00000198678 1364 ntBASIC15.21■□□□□ 0.02
Ufc1Q9CR09 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ufc1Q9CR09 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ufc1Q9CR09 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC15.21■□□□□ 0.02
Ufc1Q9CR09 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ufc1Q9CR09 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ufc1Q9CR09 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ufc1Q9CR09 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ufc1Q9CR09 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC15.2■□□□□ 0.02
Ufc1Q9CR09 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ufc1Q9CR09 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ufc1Q9CR09 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ufc1Q9CR09 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ufc1Q9CR09 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ufc1Q9CR09 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ufc1Q9CR09 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Ufc1Q9CR09 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ufc1Q9CR09 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ufc1Q9CR09 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ufc1Q9CR09 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Ufc1Q9CR09 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Ufc1Q9CR09 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ufc1Q9CR09 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ufc1Q9CR09 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ufc1Q9CR09 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ufc1Q9CR09 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC15.19■□□□□ 0.02
Ufc1Q9CR09 AC140930.3-201ENSMUST00000222935 274 ntBASIC15.19■□□□□ 0.02
Ufc1Q9CR09 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ufc1Q9CR09 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ufc1Q9CR09 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Ufc1Q9CR09 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ufc1Q9CR09 Golph3-202ENSMUST00000226517 2359 ntBASIC15.19■□□□□ 0.02
Ufc1Q9CR09 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ufc1Q9CR09 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ufc1Q9CR09 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Ufc1Q9CR09 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC15.18■□□□□ 0.02
Ufc1Q9CR09 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ufc1Q9CR09 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ufc1Q9CR09 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ufc1Q9CR09 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ufc1Q9CR09 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ufc1Q9CR09 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ufc1Q9CR09 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC15.18■□□□□ 0.02
Ufc1Q9CR09 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ufc1Q9CR09 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Ufc1Q9CR09 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ufc1Q9CR09 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ufc1Q9CR09 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ufc1Q9CR09 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ufc1Q9CR09 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Ufc1Q9CR09 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ufc1Q9CR09 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
Ufc1Q9CR09 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ufc1Q9CR09 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ufc1Q9CR09 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC15.17■□□□□ 0.02
Ufc1Q9CR09 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ufc1Q9CR09 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ufc1Q9CR09 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ufc1Q9CR09 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ufc1Q9CR09 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC15.17■□□□□ 0.02
Ufc1Q9CR09 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC15.17■□□□□ 0.02
Ufc1Q9CR09 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Ufc1Q9CR09 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ufc1Q9CR09 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ufc1Q9CR09 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms