Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gm12896-201ENSMUST00000118430 226 ntBASIC20.11■□□□□ 0.81
Cdh23Q99PF4 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Cdh23Q99PF4 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Cdh23Q99PF4 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.11■□□□□ 0.81
Cdh23Q99PF4 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cdh23Q99PF4 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cdh23Q99PF4 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cdh23Q99PF4 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cdh23Q99PF4 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.1■□□□□ 0.81
Cdh23Q99PF4 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC20.1■□□□□ 0.81
Cdh23Q99PF4 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC20.1■□□□□ 0.81
Cdh23Q99PF4 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cdh23Q99PF4 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Cdh23Q99PF4 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cdh23Q99PF4 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC20.09■□□□□ 0.81
Cdh23Q99PF4 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cdh23Q99PF4 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cdh23Q99PF4 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cdh23Q99PF4 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC20.09■□□□□ 0.81
Cdh23Q99PF4 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cdh23Q99PF4 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cdh23Q99PF4 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cdh23Q99PF4 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cdh23Q99PF4 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cdh23Q99PF4 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC20.08■□□□□ 0.81
Cdh23Q99PF4 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cdh23Q99PF4 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC20.08■□□□□ 0.81
Cdh23Q99PF4 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.08■□□□□ 0.81
Cdh23Q99PF4 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cdh23Q99PF4 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.08■□□□□ 0.8
Cdh23Q99PF4 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Cdh23Q99PF4 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cdh23Q99PF4 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cdh23Q99PF4 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Cdh23Q99PF4 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Cdh23Q99PF4 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Cdh23Q99PF4 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cdh23Q99PF4 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cdh23Q99PF4 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cdh23Q99PF4 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cdh23Q99PF4 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cdh23Q99PF4 Gm37055-201ENSMUST00000191866 133 ntBASIC20.07■□□□□ 0.8
Cdh23Q99PF4 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Cdh23Q99PF4 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cdh23Q99PF4 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Cdh23Q99PF4 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Cdh23Q99PF4 Rab3c-203ENSMUST00000224180 967 ntBASIC20.06■□□□□ 0.8
Cdh23Q99PF4 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cdh23Q99PF4 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cdh23Q99PF4 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cdh23Q99PF4 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Cdh23Q99PF4 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cdh23Q99PF4 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Cdh23Q99PF4 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cdh23Q99PF4 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC20.06■□□□□ 0.8
Cdh23Q99PF4 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cdh23Q99PF4 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cdh23Q99PF4 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.06■□□□□ 0.8
Cdh23Q99PF4 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cdh23Q99PF4 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC20.05■□□□□ 0.8
Cdh23Q99PF4 Gm10459-201ENSMUST00000202708 1155 ntBASIC20.05■□□□□ 0.8
Cdh23Q99PF4 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Cdh23Q99PF4 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cdh23Q99PF4 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.05■□□□□ 0.8
Cdh23Q99PF4 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cdh23Q99PF4 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Cdh23Q99PF4 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Cdh23Q99PF4 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cdh23Q99PF4 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cdh23Q99PF4 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Cdh23Q99PF4 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Cdh23Q99PF4 Gm10231-201ENSMUST00000181584 441 ntBASIC20.04■□□□□ 0.8
Cdh23Q99PF4 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cdh23Q99PF4 Gm10175-202ENSMUST00000208752 441 ntBASIC20.04■□□□□ 0.8
Cdh23Q99PF4 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cdh23Q99PF4 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cdh23Q99PF4 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cdh23Q99PF4 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cdh23Q99PF4 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.04■□□□□ 0.8
Cdh23Q99PF4 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.04■□□□□ 0.8
Cdh23Q99PF4 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Cdh23Q99PF4 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Cdh23Q99PF4 Gm10167-201ENSMUST00000150411 1479 ntBASIC20.03■□□□□ 0.8
Cdh23Q99PF4 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cdh23Q99PF4 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
Cdh23Q99PF4 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cdh23Q99PF4 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Cdh23Q99PF4 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cdh23Q99PF4 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cdh23Q99PF4 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cdh23Q99PF4 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC20.02■□□□□ 0.8
Cdh23Q99PF4 Mir6236-201ENSMUST00000184437 123 ntBASIC20.02■□□□□ 0.8
Cdh23Q99PF4 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Cdh23Q99PF4 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cdh23Q99PF4 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cdh23Q99PF4 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.02■□□□□ 0.8
Cdh23Q99PF4 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Cdh23Q99PF4 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cdh23Q99PF4 Gm10698-201ENSMUST00000182663 604 ntBASIC20.02■□□□□ 0.8
Cdh23Q99PF4 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms