Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nkx6-1Q99MA9 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Nkx6-1Q99MA9 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nkx6-1Q99MA9 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nkx6-1Q99MA9 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Nkx6-1Q99MA9 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Nkx6-1Q99MA9 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC18.19■□□□□ 0.5
Nkx6-1Q99MA9 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.19■□□□□ 0.5
Nkx6-1Q99MA9 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nkx6-1Q99MA9 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nkx6-1Q99MA9 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.19■□□□□ 0.5
Nkx6-1Q99MA9 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nkx6-1Q99MA9 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nkx6-1Q99MA9 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nkx6-1Q99MA9 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Nkx6-1Q99MA9 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Nkx6-1Q99MA9 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nkx6-1Q99MA9 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Nkx6-1Q99MA9 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Nkx6-1Q99MA9 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.18■□□□□ 0.5
Nkx6-1Q99MA9 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Nkx6-1Q99MA9 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
Nkx6-1Q99MA9 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nkx6-1Q99MA9 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nkx6-1Q99MA9 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nkx6-1Q99MA9 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.18■□□□□ 0.5
Nkx6-1Q99MA9 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nkx6-1Q99MA9 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nkx6-1Q99MA9 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nkx6-1Q99MA9 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Nkx6-1Q99MA9 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.17■□□□□ 0.5
Nkx6-1Q99MA9 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nkx6-1Q99MA9 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nkx6-1Q99MA9 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Nkx6-1Q99MA9 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nkx6-1Q99MA9 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nkx6-1Q99MA9 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18.16■□□□□ 0.5
Nkx6-1Q99MA9 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nkx6-1Q99MA9 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Nkx6-1Q99MA9 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Nkx6-1Q99MA9 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nkx6-1Q99MA9 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.16■□□□□ 0.5
Nkx6-1Q99MA9 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Nkx6-1Q99MA9 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Nkx6-1Q99MA9 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nkx6-1Q99MA9 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nkx6-1Q99MA9 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nkx6-1Q99MA9 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nkx6-1Q99MA9 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Nkx6-1Q99MA9 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Nkx6-1Q99MA9 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.16■□□□□ 0.5
Nkx6-1Q99MA9 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Nkx6-1Q99MA9 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nkx6-1Q99MA9 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nkx6-1Q99MA9 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nkx6-1Q99MA9 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nkx6-1Q99MA9 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Nkx6-1Q99MA9 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nkx6-1Q99MA9 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Nkx6-1Q99MA9 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Nkx6-1Q99MA9 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nkx6-1Q99MA9 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Nkx6-1Q99MA9 Gm13836-201ENSMUST00000121159 501 ntBASIC18.14■□□□□ 0.49
Nkx6-1Q99MA9 AC130671.1-201ENSMUST00000227384 1237 ntBASIC18.14■□□□□ 0.49
Nkx6-1Q99MA9 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Nkx6-1Q99MA9 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nkx6-1Q99MA9 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Nkx6-1Q99MA9 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nkx6-1Q99MA9 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Nkx6-1Q99MA9 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC18.13■□□□□ 0.49
Nkx6-1Q99MA9 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nkx6-1Q99MA9 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nkx6-1Q99MA9 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18.13■□□□□ 0.49
Nkx6-1Q99MA9 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.13■□□□□ 0.49
Nkx6-1Q99MA9 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nkx6-1Q99MA9 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nkx6-1Q99MA9 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nkx6-1Q99MA9 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Nkx6-1Q99MA9 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nkx6-1Q99MA9 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Nkx6-1Q99MA9 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Nkx6-1Q99MA9 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Nkx6-1Q99MA9 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nkx6-1Q99MA9 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
Nkx6-1Q99MA9 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.12■□□□□ 0.49
Nkx6-1Q99MA9 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nkx6-1Q99MA9 Rab3c-203ENSMUST00000224180 967 ntBASIC18.12■□□□□ 0.49
Nkx6-1Q99MA9 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nkx6-1Q99MA9 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nkx6-1Q99MA9 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nkx6-1Q99MA9 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Nkx6-1Q99MA9 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nkx6-1Q99MA9 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Nkx6-1Q99MA9 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nkx6-1Q99MA9 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nkx6-1Q99MA9 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nkx6-1Q99MA9 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Nkx6-1Q99MA9 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nkx6-1Q99MA9 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC18.11■□□□□ 0.49
Nkx6-1Q99MA9 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms