Protein–RNA interactions for Protein: Q99M54

Cdca3, Cell division cycle-associated protein 3, mousemouse

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdca3Q99M54 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cdca3Q99M54 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cdca3Q99M54 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cdca3Q99M54 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cdca3Q99M54 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cdca3Q99M54 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
Cdca3Q99M54 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cdca3Q99M54 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Cdca3Q99M54 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cdca3Q99M54 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cdca3Q99M54 Gm40848-201ENSMUST00000221998 324 ntBASIC17.92■□□□□ 0.46
Cdca3Q99M54 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
Cdca3Q99M54 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cdca3Q99M54 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cdca3Q99M54 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cdca3Q99M54 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cdca3Q99M54 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cdca3Q99M54 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
Cdca3Q99M54 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cdca3Q99M54 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cdca3Q99M54 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cdca3Q99M54 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cdca3Q99M54 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cdca3Q99M54 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cdca3Q99M54 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cdca3Q99M54 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cdca3Q99M54 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cdca3Q99M54 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cdca3Q99M54 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.9■□□□□ 0.46
Cdca3Q99M54 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.9■□□□□ 0.46
Cdca3Q99M54 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cdca3Q99M54 Gm37179-201ENSMUST00000194862 823 ntBASIC17.9■□□□□ 0.46
Cdca3Q99M54 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.9■□□□□ 0.46
Cdca3Q99M54 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cdca3Q99M54 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cdca3Q99M54 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cdca3Q99M54 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cdca3Q99M54 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cdca3Q99M54 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.46
Cdca3Q99M54 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.89■□□□□ 0.45
Cdca3Q99M54 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
Cdca3Q99M54 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cdca3Q99M54 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cdca3Q99M54 Gm27011-201ENSMUST00000182352 972 ntBASIC17.89■□□□□ 0.45
Cdca3Q99M54 Spcs1-204ENSMUST00000226782 949 ntBASIC17.89■□□□□ 0.45
Cdca3Q99M54 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cdca3Q99M54 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cdca3Q99M54 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cdca3Q99M54 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Cdca3Q99M54 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cdca3Q99M54 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cdca3Q99M54 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cdca3Q99M54 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cdca3Q99M54 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cdca3Q99M54 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cdca3Q99M54 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.88■□□□□ 0.45
Cdca3Q99M54 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.88■□□□□ 0.45
Cdca3Q99M54 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.88■□□□□ 0.45
Cdca3Q99M54 Gm18671-201ENSMUST00000214826 683 ntBASIC17.88■□□□□ 0.45
Cdca3Q99M54 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cdca3Q99M54 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cdca3Q99M54 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cdca3Q99M54 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cdca3Q99M54 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cdca3Q99M54 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cdca3Q99M54 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cdca3Q99M54 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Cdca3Q99M54 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.87■□□□□ 0.45
Cdca3Q99M54 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cdca3Q99M54 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cdca3Q99M54 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cdca3Q99M54 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cdca3Q99M54 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Cdca3Q99M54 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cdca3Q99M54 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Cdca3Q99M54 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cdca3Q99M54 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cdca3Q99M54 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.87■□□□□ 0.45
Cdca3Q99M54 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cdca3Q99M54 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.86■□□□□ 0.45
Cdca3Q99M54 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cdca3Q99M54 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cdca3Q99M54 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.86■□□□□ 0.45
Cdca3Q99M54 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cdca3Q99M54 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cdca3Q99M54 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cdca3Q99M54 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cdca3Q99M54 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cdca3Q99M54 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cdca3Q99M54 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cdca3Q99M54 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.85■□□□□ 0.45
Cdca3Q99M54 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cdca3Q99M54 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC17.85■□□□□ 0.45
Cdca3Q99M54 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.85■□□□□ 0.45
Cdca3Q99M54 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Cdca3Q99M54 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cdca3Q99M54 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.85■□□□□ 0.45
Cdca3Q99M54 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Cdca3Q99M54 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Cdca3Q99M54 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms