Protein–RNA interactions for Protein: Q96EQ9

Prdm9, Histone-lysine N-methyltransferase PRDM9, mousemouse

Predictions only

Length 843 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm9Q96EQ9 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Prdm9Q96EQ9 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Prdm9Q96EQ9 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Prdm9Q96EQ9 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.11■□□□□ 0.65
Prdm9Q96EQ9 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.11■□□□□ 0.65
Prdm9Q96EQ9 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Prdm9Q96EQ9 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Prdm9Q96EQ9 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.11■□□□□ 0.65
Prdm9Q96EQ9 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Prdm9Q96EQ9 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Prdm9Q96EQ9 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Prdm9Q96EQ9 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Prdm9Q96EQ9 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Prdm9Q96EQ9 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Prdm9Q96EQ9 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Prdm9Q96EQ9 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Prdm9Q96EQ9 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Prdm9Q96EQ9 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Prdm9Q96EQ9 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.09■□□□□ 0.65
Prdm9Q96EQ9 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Prdm9Q96EQ9 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Prdm9Q96EQ9 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Prdm9Q96EQ9 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC19.09■□□□□ 0.65
Prdm9Q96EQ9 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Prdm9Q96EQ9 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Prdm9Q96EQ9 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Prdm9Q96EQ9 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
Prdm9Q96EQ9 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Prdm9Q96EQ9 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Prdm9Q96EQ9 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Prdm9Q96EQ9 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Prdm9Q96EQ9 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.08■□□□□ 0.65
Prdm9Q96EQ9 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.08■□□□□ 0.65
Prdm9Q96EQ9 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Prdm9Q96EQ9 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.08■□□□□ 0.64
Prdm9Q96EQ9 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Prdm9Q96EQ9 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.08■□□□□ 0.64
Prdm9Q96EQ9 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Prdm9Q96EQ9 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Prdm9Q96EQ9 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Prdm9Q96EQ9 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Prdm9Q96EQ9 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.07■□□□□ 0.64
Prdm9Q96EQ9 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Prdm9Q96EQ9 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Prdm9Q96EQ9 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Prdm9Q96EQ9 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Prdm9Q96EQ9 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Prdm9Q96EQ9 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Prdm9Q96EQ9 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Prdm9Q96EQ9 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Prdm9Q96EQ9 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Prdm9Q96EQ9 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Prdm9Q96EQ9 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Prdm9Q96EQ9 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Prdm9Q96EQ9 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Prdm9Q96EQ9 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Prdm9Q96EQ9 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Prdm9Q96EQ9 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Prdm9Q96EQ9 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Prdm9Q96EQ9 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Prdm9Q96EQ9 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Prdm9Q96EQ9 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Prdm9Q96EQ9 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.06■□□□□ 0.64
Prdm9Q96EQ9 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Prdm9Q96EQ9 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Prdm9Q96EQ9 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Prdm9Q96EQ9 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Prdm9Q96EQ9 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Prdm9Q96EQ9 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Prdm9Q96EQ9 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.06■□□□□ 0.64
Prdm9Q96EQ9 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.05■□□□□ 0.64
Prdm9Q96EQ9 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Prdm9Q96EQ9 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Prdm9Q96EQ9 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Prdm9Q96EQ9 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Prdm9Q96EQ9 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC19.05■□□□□ 0.64
Prdm9Q96EQ9 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Prdm9Q96EQ9 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.05■□□□□ 0.64
Prdm9Q96EQ9 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Prdm9Q96EQ9 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Prdm9Q96EQ9 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Prdm9Q96EQ9 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Prdm9Q96EQ9 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Prdm9Q96EQ9 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC19.04■□□□□ 0.64
Prdm9Q96EQ9 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Prdm9Q96EQ9 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.04■□□□□ 0.64
Prdm9Q96EQ9 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.04■□□□□ 0.64
Prdm9Q96EQ9 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.04■□□□□ 0.64
Prdm9Q96EQ9 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Prdm9Q96EQ9 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Prdm9Q96EQ9 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Prdm9Q96EQ9 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Prdm9Q96EQ9 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Prdm9Q96EQ9 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Prdm9Q96EQ9 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Prdm9Q96EQ9 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Prdm9Q96EQ9 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Prdm9Q96EQ9 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Prdm9Q96EQ9 Gm37179-201ENSMUST00000194862 823 ntBASIC19.03■□□□□ 0.64
Prdm9Q96EQ9 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC19.03■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms