Protein–RNA interactions for Protein: Q91XX7

Pcdhgb2, Protocadherin gamma B2, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb2Q91XX7 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhgb2Q91XX7 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.15■□□□□ 0.5
Pcdhgb2Q91XX7 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhgb2Q91XX7 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhgb2Q91XX7 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhgb2Q91XX7 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhgb2Q91XX7 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhgb2Q91XX7 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18.15■□□□□ 0.5
Pcdhgb2Q91XX7 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Pcdhgb2Q91XX7 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhgb2Q91XX7 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhgb2Q91XX7 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhgb2Q91XX7 AA386476-201ENSMUST00000098781 1665 ntBASIC18.15■□□□□ 0.5
Pcdhgb2Q91XX7 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhgb2Q91XX7 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Pcdhgb2Q91XX7 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhgb2Q91XX7 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Pcdhgb2Q91XX7 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhgb2Q91XX7 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Pcdhgb2Q91XX7 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.14■□□□□ 0.49
Pcdhgb2Q91XX7 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhgb2Q91XX7 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.14■□□□□ 0.49
Pcdhgb2Q91XX7 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.14■□□□□ 0.49
Pcdhgb2Q91XX7 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhgb2Q91XX7 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhgb2Q91XX7 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhgb2Q91XX7 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhgb2Q91XX7 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhgb2Q91XX7 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhgb2Q91XX7 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Pcdhgb2Q91XX7 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Pcdhgb2Q91XX7 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhgb2Q91XX7 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhgb2Q91XX7 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhgb2Q91XX7 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Pcdhgb2Q91XX7 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhgb2Q91XX7 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhgb2Q91XX7 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhgb2Q91XX7 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Pcdhgb2Q91XX7 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhgb2Q91XX7 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhgb2Q91XX7 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.13■□□□□ 0.49
Pcdhgb2Q91XX7 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhgb2Q91XX7 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhgb2Q91XX7 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhgb2Q91XX7 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.13■□□□□ 0.49
Pcdhgb2Q91XX7 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhgb2Q91XX7 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.13■□□□□ 0.49
Pcdhgb2Q91XX7 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhgb2Q91XX7 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhgb2Q91XX7 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.12■□□□□ 0.49
Pcdhgb2Q91XX7 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhgb2Q91XX7 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhgb2Q91XX7 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhgb2Q91XX7 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhgb2Q91XX7 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.12■□□□□ 0.49
Pcdhgb2Q91XX7 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.12■□□□□ 0.49
Pcdhgb2Q91XX7 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Pcdhgb2Q91XX7 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhgb2Q91XX7 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhgb2Q91XX7 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhgb2Q91XX7 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Pcdhgb2Q91XX7 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhgb2Q91XX7 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhgb2Q91XX7 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
Pcdhgb2Q91XX7 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhgb2Q91XX7 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.11■□□□□ 0.49
Pcdhgb2Q91XX7 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhgb2Q91XX7 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhgb2Q91XX7 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.11■□□□□ 0.49
Pcdhgb2Q91XX7 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhgb2Q91XX7 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhgb2Q91XX7 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhgb2Q91XX7 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhgb2Q91XX7 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.1■□□□□ 0.49
Pcdhgb2Q91XX7 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.1■□□□□ 0.49
Pcdhgb2Q91XX7 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhgb2Q91XX7 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhgb2Q91XX7 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhgb2Q91XX7 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhgb2Q91XX7 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Pcdhgb2Q91XX7 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.1■□□□□ 0.49
Pcdhgb2Q91XX7 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.1■□□□□ 0.49
Pcdhgb2Q91XX7 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
Pcdhgb2Q91XX7 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.1■□□□□ 0.49
Pcdhgb2Q91XX7 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhgb2Q91XX7 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhgb2Q91XX7 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.09■□□□□ 0.49
Pcdhgb2Q91XX7 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhgb2Q91XX7 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.09■□□□□ 0.49
Pcdhgb2Q91XX7 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhgb2Q91XX7 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhgb2Q91XX7 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhgb2Q91XX7 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhgb2Q91XX7 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC18.09■□□□□ 0.49
Pcdhgb2Q91XX7 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Pcdhgb2Q91XX7 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdhgb2Q91XX7 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdhgb2Q91XX7 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdhgb2Q91XX7 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms