Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhgb4Q91XX6 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhgb4Q91XX6 Gm12251-201ENSMUST00000117893 792 ntBASIC20.46■□□□□ 0.87
Pcdhgb4Q91XX6 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.46■□□□□ 0.87
Pcdhgb4Q91XX6 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.46■□□□□ 0.87
Pcdhgb4Q91XX6 Serp2-204ENSMUST00000228055 705 ntBASIC20.46■□□□□ 0.87
Pcdhgb4Q91XX6 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Pcdhgb4Q91XX6 Gm13241-201ENSMUST00000094493 780 ntBASIC20.46■□□□□ 0.87
Pcdhgb4Q91XX6 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.46■□□□□ 0.87
Pcdhgb4Q91XX6 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Pcdhgb4Q91XX6 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Pcdhgb4Q91XX6 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhgb4Q91XX6 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhgb4Q91XX6 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhgb4Q91XX6 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhgb4Q91XX6 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Pcdhgb4Q91XX6 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhgb4Q91XX6 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhgb4Q91XX6 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhgb4Q91XX6 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhgb4Q91XX6 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.45■□□□□ 0.86
Pcdhgb4Q91XX6 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhgb4Q91XX6 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.45■□□□□ 0.86
Pcdhgb4Q91XX6 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhgb4Q91XX6 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
Pcdhgb4Q91XX6 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
Pcdhgb4Q91XX6 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhgb4Q91XX6 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhgb4Q91XX6 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.44■□□□□ 0.86
Pcdhgb4Q91XX6 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
Pcdhgb4Q91XX6 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Pcdhgb4Q91XX6 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Pcdhgb4Q91XX6 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhgb4Q91XX6 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhgb4Q91XX6 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.44■□□□□ 0.86
Pcdhgb4Q91XX6 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Pcdhgb4Q91XX6 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhgb4Q91XX6 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhgb4Q91XX6 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Pcdhgb4Q91XX6 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhgb4Q91XX6 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhgb4Q91XX6 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.43■□□□□ 0.86
Pcdhgb4Q91XX6 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhgb4Q91XX6 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhgb4Q91XX6 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.43■□□□□ 0.86
Pcdhgb4Q91XX6 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhgb4Q91XX6 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.43■□□□□ 0.86
Pcdhgb4Q91XX6 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhgb4Q91XX6 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhgb4Q91XX6 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhgb4Q91XX6 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhgb4Q91XX6 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhgb4Q91XX6 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhgb4Q91XX6 Spcs1-204ENSMUST00000226782 949 ntBASIC20.42■□□□□ 0.86
Pcdhgb4Q91XX6 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Pcdhgb4Q91XX6 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhgb4Q91XX6 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhgb4Q91XX6 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhgb4Q91XX6 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhgb4Q91XX6 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhgb4Q91XX6 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhgb4Q91XX6 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhgb4Q91XX6 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhgb4Q91XX6 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhgb4Q91XX6 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhgb4Q91XX6 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhgb4Q91XX6 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhgb4Q91XX6 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhgb4Q91XX6 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Pcdhgb4Q91XX6 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Pcdhgb4Q91XX6 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Pcdhgb4Q91XX6 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhgb4Q91XX6 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhgb4Q91XX6 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhgb4Q91XX6 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.4■□□□□ 0.86
Pcdhgb4Q91XX6 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhgb4Q91XX6 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhgb4Q91XX6 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhgb4Q91XX6 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Pcdhgb4Q91XX6 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhgb4Q91XX6 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.86
Pcdhgb4Q91XX6 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pcdhgb4Q91XX6 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pcdhgb4Q91XX6 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pcdhgb4Q91XX6 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pcdhgb4Q91XX6 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pcdhgb4Q91XX6 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pcdhgb4Q91XX6 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pcdhgb4Q91XX6 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdhgb4Q91XX6 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.39■□□□□ 0.85
Pcdhgb4Q91XX6 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdhgb4Q91XX6 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.39■□□□□ 0.85
Pcdhgb4Q91XX6 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Pcdhgb4Q91XX6 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdhgb4Q91XX6 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdhgb4Q91XX6 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhgb4Q91XX6 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhgb4Q91XX6 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhgb4Q91XX6 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhgb4Q91XX6 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms