Protein–RNA interactions for Protein: Q91XX5

Pcdhgb5, Protocadherin gamma B5, mousemouse

Predictions only

Length 926 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb5Q91XX5 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhgb5Q91XX5 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Pcdhgb5Q91XX5 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhgb5Q91XX5 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhgb5Q91XX5 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhgb5Q91XX5 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhgb5Q91XX5 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Pcdhgb5Q91XX5 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhgb5Q91XX5 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhgb5Q91XX5 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhgb5Q91XX5 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.23■□□□□ 0.67
Pcdhgb5Q91XX5 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhgb5Q91XX5 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhgb5Q91XX5 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.22■□□□□ 0.67
Pcdhgb5Q91XX5 Gm13146-201ENSMUST00000118508 780 ntBASIC19.22■□□□□ 0.67
Pcdhgb5Q91XX5 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.22■□□□□ 0.67
Pcdhgb5Q91XX5 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.22■□□□□ 0.67
Pcdhgb5Q91XX5 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhgb5Q91XX5 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhgb5Q91XX5 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhgb5Q91XX5 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Pcdhgb5Q91XX5 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhgb5Q91XX5 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhgb5Q91XX5 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhgb5Q91XX5 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhgb5Q91XX5 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhgb5Q91XX5 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Pcdhgb5Q91XX5 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.21■□□□□ 0.67
Pcdhgb5Q91XX5 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Pcdhgb5Q91XX5 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhgb5Q91XX5 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhgb5Q91XX5 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhgb5Q91XX5 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhgb5Q91XX5 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhgb5Q91XX5 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhgb5Q91XX5 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhgb5Q91XX5 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhgb5Q91XX5 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhgb5Q91XX5 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.2■□□□□ 0.66
Pcdhgb5Q91XX5 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhgb5Q91XX5 Gm38205-201ENSMUST00000192243 258 ntBASIC19.2■□□□□ 0.66
Pcdhgb5Q91XX5 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Pcdhgb5Q91XX5 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Pcdhgb5Q91XX5 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhgb5Q91XX5 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhgb5Q91XX5 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhgb5Q91XX5 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhgb5Q91XX5 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhgb5Q91XX5 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhgb5Q91XX5 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Pcdhgb5Q91XX5 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhgb5Q91XX5 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Pcdhgb5Q91XX5 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhgb5Q91XX5 Gm7290-201ENSMUST00000104990 617 ntBASIC19.19■□□□□ 0.66
Pcdhgb5Q91XX5 Gm12918-201ENSMUST00000120234 636 ntBASIC19.19■□□□□ 0.66
Pcdhgb5Q91XX5 Gm15710-201ENSMUST00000121821 636 ntBASIC19.19■□□□□ 0.66
Pcdhgb5Q91XX5 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhgb5Q91XX5 Gm5075-201ENSMUST00000196916 622 ntBASIC19.19■□□□□ 0.66
Pcdhgb5Q91XX5 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.19■□□□□ 0.66
Pcdhgb5Q91XX5 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.19■□□□□ 0.66
Pcdhgb5Q91XX5 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhgb5Q91XX5 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhgb5Q91XX5 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhgb5Q91XX5 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhgb5Q91XX5 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhgb5Q91XX5 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhgb5Q91XX5 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.18■□□□□ 0.66
Pcdhgb5Q91XX5 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhgb5Q91XX5 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhgb5Q91XX5 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.18■□□□□ 0.66
Pcdhgb5Q91XX5 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhgb5Q91XX5 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhgb5Q91XX5 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhgb5Q91XX5 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhgb5Q91XX5 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhgb5Q91XX5 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhgb5Q91XX5 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhgb5Q91XX5 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhgb5Q91XX5 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.17■□□□□ 0.66
Pcdhgb5Q91XX5 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhgb5Q91XX5 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhgb5Q91XX5 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhgb5Q91XX5 Gm12441-201ENSMUST00000121806 588 ntBASIC19.17■□□□□ 0.66
Pcdhgb5Q91XX5 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.17■□□□□ 0.66
Pcdhgb5Q91XX5 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhgb5Q91XX5 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC19.17■□□□□ 0.66
Pcdhgb5Q91XX5 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.17■□□□□ 0.66
Pcdhgb5Q91XX5 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.17■□□□□ 0.66
Pcdhgb5Q91XX5 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.17■□□□□ 0.66
Pcdhgb5Q91XX5 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.17■□□□□ 0.66
Pcdhgb5Q91XX5 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.17■□□□□ 0.66
Pcdhgb5Q91XX5 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhgb5Q91XX5 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.17■□□□□ 0.66
Pcdhgb5Q91XX5 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Pcdhgb5Q91XX5 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhgb5Q91XX5 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Pcdhgb5Q91XX5 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Pcdhgb5Q91XX5 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhgb5Q91XX5 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.17■□□□□ 0.66
Pcdhgb5Q91XX5 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms