Protein–RNA interactions for Protein: Q91XX5

Pcdhgb5, Protocadherin gamma B5, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb5Q91XX5 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhgb5Q91XX5 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Pcdhgb5Q91XX5 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhgb5Q91XX5 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhgb5Q91XX5 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhgb5Q91XX5 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhgb5Q91XX5 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Pcdhgb5Q91XX5 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhgb5Q91XX5 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhgb5Q91XX5 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhgb5Q91XX5 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.23■□□□□ 0.67
Pcdhgb5Q91XX5 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhgb5Q91XX5 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhgb5Q91XX5 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.22■□□□□ 0.67
Pcdhgb5Q91XX5 Gm13146-201ENSMUST00000118508 780 ntBASIC19.22■□□□□ 0.67
Pcdhgb5Q91XX5 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.22■□□□□ 0.67
Pcdhgb5Q91XX5 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.22■□□□□ 0.67
Pcdhgb5Q91XX5 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhgb5Q91XX5 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhgb5Q91XX5 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhgb5Q91XX5 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Pcdhgb5Q91XX5 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhgb5Q91XX5 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhgb5Q91XX5 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhgb5Q91XX5 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhgb5Q91XX5 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhgb5Q91XX5 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Pcdhgb5Q91XX5 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.21■□□□□ 0.67
Pcdhgb5Q91XX5 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Pcdhgb5Q91XX5 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhgb5Q91XX5 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhgb5Q91XX5 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhgb5Q91XX5 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhgb5Q91XX5 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhgb5Q91XX5 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhgb5Q91XX5 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhgb5Q91XX5 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhgb5Q91XX5 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhgb5Q91XX5 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.2■□□□□ 0.66
Pcdhgb5Q91XX5 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhgb5Q91XX5 Gm38205-201ENSMUST00000192243 258 ntBASIC19.2■□□□□ 0.66
Pcdhgb5Q91XX5 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Pcdhgb5Q91XX5 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Pcdhgb5Q91XX5 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhgb5Q91XX5 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhgb5Q91XX5 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhgb5Q91XX5 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhgb5Q91XX5 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhgb5Q91XX5 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhgb5Q91XX5 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Pcdhgb5Q91XX5 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhgb5Q91XX5 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Pcdhgb5Q91XX5 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhgb5Q91XX5 Gm7290-201ENSMUST00000104990 617 ntBASIC19.19■□□□□ 0.66
Pcdhgb5Q91XX5 Gm12918-201ENSMUST00000120234 636 ntBASIC19.19■□□□□ 0.66
Pcdhgb5Q91XX5 Gm15710-201ENSMUST00000121821 636 ntBASIC19.19■□□□□ 0.66
Pcdhgb5Q91XX5 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhgb5Q91XX5 Gm5075-201ENSMUST00000196916 622 ntBASIC19.19■□□□□ 0.66
Pcdhgb5Q91XX5 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.19■□□□□ 0.66
Pcdhgb5Q91XX5 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.19■□□□□ 0.66
Pcdhgb5Q91XX5 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhgb5Q91XX5 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhgb5Q91XX5 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhgb5Q91XX5 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhgb5Q91XX5 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhgb5Q91XX5 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhgb5Q91XX5 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.18■□□□□ 0.66
Pcdhgb5Q91XX5 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhgb5Q91XX5 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhgb5Q91XX5 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.18■□□□□ 0.66
Pcdhgb5Q91XX5 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhgb5Q91XX5 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhgb5Q91XX5 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhgb5Q91XX5 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhgb5Q91XX5 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhgb5Q91XX5 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhgb5Q91XX5 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhgb5Q91XX5 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhgb5Q91XX5 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.17■□□□□ 0.66
Pcdhgb5Q91XX5 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhgb5Q91XX5 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhgb5Q91XX5 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhgb5Q91XX5 Gm12441-201ENSMUST00000121806 588 ntBASIC19.17■□□□□ 0.66
Pcdhgb5Q91XX5 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.17■□□□□ 0.66
Pcdhgb5Q91XX5 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhgb5Q91XX5 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC19.17■□□□□ 0.66
Pcdhgb5Q91XX5 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.17■□□□□ 0.66
Pcdhgb5Q91XX5 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.17■□□□□ 0.66
Pcdhgb5Q91XX5 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.17■□□□□ 0.66
Pcdhgb5Q91XX5 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.17■□□□□ 0.66
Pcdhgb5Q91XX5 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.17■□□□□ 0.66
Pcdhgb5Q91XX5 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhgb5Q91XX5 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.17■□□□□ 0.66
Pcdhgb5Q91XX5 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Pcdhgb5Q91XX5 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhgb5Q91XX5 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Pcdhgb5Q91XX5 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Pcdhgb5Q91XX5 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhgb5Q91XX5 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.17■□□□□ 0.66
Pcdhgb5Q91XX5 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms