Protein–RNA interactions for Protein: Q91XW9

Pcdhgc5, MCG133388, isoform CRA_f, mousemouse

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc5Q91XW9 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Pcdhgc5Q91XW9 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
Pcdhgc5Q91XW9 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
Pcdhgc5Q91XW9 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Pcdhgc5Q91XW9 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC22.06■■□□□ 1.12
Pcdhgc5Q91XW9 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Pcdhgc5Q91XW9 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Pcdhgc5Q91XW9 Gm13234-201ENSMUST00000120010 747 ntBASIC22.06■■□□□ 1.12
Pcdhgc5Q91XW9 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Pcdhgc5Q91XW9 AC137127.1-201ENSMUST00000213466 1078 ntBASIC22.06■■□□□ 1.12
Pcdhgc5Q91XW9 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Pcdhgc5Q91XW9 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Pcdhgc5Q91XW9 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Pcdhgc5Q91XW9 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC22.06■■□□□ 1.12
Pcdhgc5Q91XW9 AC152827.1-201ENSMUST00000221143 2189 ntBASIC22.06■■□□□ 1.12
Pcdhgc5Q91XW9 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Pcdhgc5Q91XW9 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Pcdhgc5Q91XW9 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Pcdhgc5Q91XW9 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
Pcdhgc5Q91XW9 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Pcdhgc5Q91XW9 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC22.05■■□□□ 1.12
Pcdhgc5Q91XW9 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Pcdhgc5Q91XW9 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC22.05■■□□□ 1.12
Pcdhgc5Q91XW9 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC22.05■■□□□ 1.12
Pcdhgc5Q91XW9 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
Pcdhgc5Q91XW9 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC22.05■■□□□ 1.12
Pcdhgc5Q91XW9 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
Pcdhgc5Q91XW9 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Pcdhgc5Q91XW9 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Pcdhgc5Q91XW9 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Pcdhgc5Q91XW9 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Pcdhgc5Q91XW9 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Pcdhgc5Q91XW9 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Pcdhgc5Q91XW9 Gm43545-201ENSMUST00000196765 2779 ntBASIC22.04■■□□□ 1.12
Pcdhgc5Q91XW9 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
Pcdhgc5Q91XW9 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Pcdhgc5Q91XW9 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Pcdhgc5Q91XW9 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC22.04■■□□□ 1.12
Pcdhgc5Q91XW9 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Pcdhgc5Q91XW9 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Pcdhgc5Q91XW9 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pcdhgc5Q91XW9 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pcdhgc5Q91XW9 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pcdhgc5Q91XW9 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
Pcdhgc5Q91XW9 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC22.03■■□□□ 1.12
Pcdhgc5Q91XW9 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC22.03■■□□□ 1.12
Pcdhgc5Q91XW9 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Pcdhgc5Q91XW9 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pcdhgc5Q91XW9 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC22.03■■□□□ 1.12
Pcdhgc5Q91XW9 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC22.03■■□□□ 1.12
Pcdhgc5Q91XW9 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Pcdhgc5Q91XW9 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC22.03■■□□□ 1.12
Pcdhgc5Q91XW9 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
Pcdhgc5Q91XW9 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pcdhgc5Q91XW9 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pcdhgc5Q91XW9 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pcdhgc5Q91XW9 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Pcdhgc5Q91XW9 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Pcdhgc5Q91XW9 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Pcdhgc5Q91XW9 Gm10653-202ENSMUST00000139570 835 ntBASIC22.02■■□□□ 1.12
Pcdhgc5Q91XW9 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC22.02■■□□□ 1.12
Pcdhgc5Q91XW9 Ap3s1-204ENSMUST00000225520 957 ntBASIC22.02■■□□□ 1.12
Pcdhgc5Q91XW9 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Pcdhgc5Q91XW9 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Pcdhgc5Q91XW9 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Pcdhgc5Q91XW9 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Pcdhgc5Q91XW9 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
Pcdhgc5Q91XW9 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pcdhgc5Q91XW9 Gm14281-201ENSMUST00000121700 1294 ntBASIC22.01■■□□□ 1.11
Pcdhgc5Q91XW9 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC22.01■■□□□ 1.11
Pcdhgc5Q91XW9 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC22.01■■□□□ 1.11
Pcdhgc5Q91XW9 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pcdhgc5Q91XW9 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pcdhgc5Q91XW9 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pcdhgc5Q91XW9 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pcdhgc5Q91XW9 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Pcdhgc5Q91XW9 Nespas-201ENSMUST00000143738 1083 ntBASIC22■■□□□ 1.11
Pcdhgc5Q91XW9 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
Pcdhgc5Q91XW9 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Pcdhgc5Q91XW9 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Pcdhgc5Q91XW9 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdhgc5Q91XW9 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdhgc5Q91XW9 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC21.99■■□□□ 1.11
Pcdhgc5Q91XW9 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdhgc5Q91XW9 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
Pcdhgc5Q91XW9 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdhgc5Q91XW9 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdhgc5Q91XW9 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdhgc5Q91XW9 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC21.99■■□□□ 1.11
Pcdhgc5Q91XW9 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pcdhgc5Q91XW9 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pcdhgc5Q91XW9 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Pcdhgc5Q91XW9 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pcdhgc5Q91XW9 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Pcdhgc5Q91XW9 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC21.98■■□□□ 1.11
Pcdhgc5Q91XW9 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pcdhgc5Q91XW9 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pcdhgc5Q91XW9 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pcdhgc5Q91XW9 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC21.98■■□□□ 1.11
Pcdhgc5Q91XW9 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms