Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdh18Q8VHR0 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdh18Q8VHR0 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.58■□□□□ 0.56
Pcdh18Q8VHR0 Gm5522-201ENSMUST00000189483 1242 ntBASIC18.58■□□□□ 0.56
Pcdh18Q8VHR0 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Pcdh18Q8VHR0 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.58■□□□□ 0.56
Pcdh18Q8VHR0 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdh18Q8VHR0 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdh18Q8VHR0 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdh18Q8VHR0 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdh18Q8VHR0 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdh18Q8VHR0 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdh18Q8VHR0 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.58■□□□□ 0.56
Pcdh18Q8VHR0 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdh18Q8VHR0 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdh18Q8VHR0 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdh18Q8VHR0 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdh18Q8VHR0 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdh18Q8VHR0 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdh18Q8VHR0 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdh18Q8VHR0 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdh18Q8VHR0 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdh18Q8VHR0 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
Pcdh18Q8VHR0 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdh18Q8VHR0 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdh18Q8VHR0 Gm7143-201ENSMUST00000222811 859 ntBASIC18.57■□□□□ 0.56
Pcdh18Q8VHR0 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdh18Q8VHR0 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Pcdh18Q8VHR0 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdh18Q8VHR0 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdh18Q8VHR0 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdh18Q8VHR0 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.56■□□□□ 0.56
Pcdh18Q8VHR0 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdh18Q8VHR0 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.56■□□□□ 0.56
Pcdh18Q8VHR0 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Pcdh18Q8VHR0 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC18.56■□□□□ 0.56
Pcdh18Q8VHR0 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdh18Q8VHR0 Gm5812-201ENSMUST00000061073 957 ntBASIC18.56■□□□□ 0.56
Pcdh18Q8VHR0 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdh18Q8VHR0 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
Pcdh18Q8VHR0 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdh18Q8VHR0 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Pcdh18Q8VHR0 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.56■□□□□ 0.56
Pcdh18Q8VHR0 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdh18Q8VHR0 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdh18Q8VHR0 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdh18Q8VHR0 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdh18Q8VHR0 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdh18Q8VHR0 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdh18Q8VHR0 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Pcdh18Q8VHR0 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
Pcdh18Q8VHR0 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdh18Q8VHR0 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdh18Q8VHR0 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Pcdh18Q8VHR0 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdh18Q8VHR0 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Pcdh18Q8VHR0 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdh18Q8VHR0 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdh18Q8VHR0 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.54■□□□□ 0.56
Pcdh18Q8VHR0 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdh18Q8VHR0 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdh18Q8VHR0 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdh18Q8VHR0 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdh18Q8VHR0 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdh18Q8VHR0 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.54■□□□□ 0.56
Pcdh18Q8VHR0 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18.54■□□□□ 0.56
Pcdh18Q8VHR0 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.54■□□□□ 0.56
Pcdh18Q8VHR0 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.54■□□□□ 0.56
Pcdh18Q8VHR0 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdh18Q8VHR0 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdh18Q8VHR0 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdh18Q8VHR0 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Pcdh18Q8VHR0 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdh18Q8VHR0 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdh18Q8VHR0 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdh18Q8VHR0 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Pcdh18Q8VHR0 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdh18Q8VHR0 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdh18Q8VHR0 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdh18Q8VHR0 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
Pcdh18Q8VHR0 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdh18Q8VHR0 Gm15546-201ENSMUST00000122095 826 ntBASIC18.53■□□□□ 0.56
Pcdh18Q8VHR0 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdh18Q8VHR0 AC154231.1-201ENSMUST00000220564 2175 ntBASIC18.53■□□□□ 0.56
Pcdh18Q8VHR0 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdh18Q8VHR0 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdh18Q8VHR0 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdh18Q8VHR0 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdh18Q8VHR0 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Pcdh18Q8VHR0 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Pcdh18Q8VHR0 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Pcdh18Q8VHR0 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdh18Q8VHR0 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.52■□□□□ 0.56
Pcdh18Q8VHR0 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdh18Q8VHR0 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
Pcdh18Q8VHR0 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdh18Q8VHR0 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Pcdh18Q8VHR0 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pcdh18Q8VHR0 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdh18Q8VHR0 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms