Protein–RNA interactions for Protein: Q8VEM1

Rnf130, E3 ubiquitin-protein ligase RNF130, mousemouse

Predictions only

Length 419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf130Q8VEM1 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rnf130Q8VEM1 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rnf130Q8VEM1 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rnf130Q8VEM1 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rnf130Q8VEM1 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Rnf130Q8VEM1 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.19■□□□□ 0.5
Rnf130Q8VEM1 Gm12922-201ENSMUST00000120626 809 ntBASIC18.19■□□□□ 0.5
Rnf130Q8VEM1 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.19■□□□□ 0.5
Rnf130Q8VEM1 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rnf130Q8VEM1 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rnf130Q8VEM1 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rnf130Q8VEM1 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rnf130Q8VEM1 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rnf130Q8VEM1 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rnf130Q8VEM1 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
Rnf130Q8VEM1 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Rnf130Q8VEM1 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf130Q8VEM1 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf130Q8VEM1 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf130Q8VEM1 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf130Q8VEM1 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf130Q8VEM1 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf130Q8VEM1 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf130Q8VEM1 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf130Q8VEM1 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf130Q8VEM1 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf130Q8VEM1 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf130Q8VEM1 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf130Q8VEM1 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.17■□□□□ 0.5
Rnf130Q8VEM1 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf130Q8VEM1 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf130Q8VEM1 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf130Q8VEM1 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf130Q8VEM1 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf130Q8VEM1 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf130Q8VEM1 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf130Q8VEM1 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Rnf130Q8VEM1 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Rnf130Q8VEM1 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf130Q8VEM1 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf130Q8VEM1 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf130Q8VEM1 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.16■□□□□ 0.5
Rnf130Q8VEM1 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf130Q8VEM1 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf130Q8VEM1 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf130Q8VEM1 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.15■□□□□ 0.5
Rnf130Q8VEM1 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf130Q8VEM1 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
Rnf130Q8VEM1 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf130Q8VEM1 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf130Q8VEM1 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf130Q8VEM1 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Rnf130Q8VEM1 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf130Q8VEM1 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.15■□□□□ 0.5
Rnf130Q8VEM1 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf130Q8VEM1 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf130Q8VEM1 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
Rnf130Q8VEM1 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf130Q8VEM1 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf130Q8VEM1 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf130Q8VEM1 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Rnf130Q8VEM1 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Rnf130Q8VEM1 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Rnf130Q8VEM1 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.5
Rnf130Q8VEM1 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf130Q8VEM1 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf130Q8VEM1 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Rnf130Q8VEM1 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.14■□□□□ 0.49
Rnf130Q8VEM1 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf130Q8VEM1 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf130Q8VEM1 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Rnf130Q8VEM1 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf130Q8VEM1 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf130Q8VEM1 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf130Q8VEM1 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
Rnf130Q8VEM1 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.13■□□□□ 0.49
Rnf130Q8VEM1 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
Rnf130Q8VEM1 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf130Q8VEM1 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf130Q8VEM1 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf130Q8VEM1 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf130Q8VEM1 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Rnf130Q8VEM1 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Rnf130Q8VEM1 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf130Q8VEM1 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.13■□□□□ 0.49
Rnf130Q8VEM1 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf130Q8VEM1 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf130Q8VEM1 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf130Q8VEM1 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.12■□□□□ 0.49
Rnf130Q8VEM1 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf130Q8VEM1 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf130Q8VEM1 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.12■□□□□ 0.49
Rnf130Q8VEM1 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.12■□□□□ 0.49
Rnf130Q8VEM1 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf130Q8VEM1 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.12■□□□□ 0.49
Rnf130Q8VEM1 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf130Q8VEM1 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf130Q8VEM1 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf130Q8VEM1 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf130Q8VEM1 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 150.2 ms