Protein–RNA interactions for Protein: Q8VE28

Nkd2, Protein naked cuticle homolog 2, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd2Q8VE28 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Nkd2Q8VE28 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.61■□□□□ 0.41
Nkd2Q8VE28 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Nkd2Q8VE28 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nkd2Q8VE28 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nkd2Q8VE28 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nkd2Q8VE28 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC17.6■□□□□ 0.41
Nkd2Q8VE28 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Nkd2Q8VE28 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.6■□□□□ 0.41
Nkd2Q8VE28 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Nkd2Q8VE28 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nkd2Q8VE28 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC17.6■□□□□ 0.41
Nkd2Q8VE28 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.6■□□□□ 0.41
Nkd2Q8VE28 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.6■□□□□ 0.41
Nkd2Q8VE28 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nkd2Q8VE28 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Nkd2Q8VE28 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nkd2Q8VE28 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nkd2Q8VE28 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Nkd2Q8VE28 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC17.59■□□□□ 0.41
Nkd2Q8VE28 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nkd2Q8VE28 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Nkd2Q8VE28 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nkd2Q8VE28 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nkd2Q8VE28 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.59■□□□□ 0.41
Nkd2Q8VE28 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Nkd2Q8VE28 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Nkd2Q8VE28 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nkd2Q8VE28 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nkd2Q8VE28 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nkd2Q8VE28 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nkd2Q8VE28 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nkd2Q8VE28 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.58■□□□□ 0.41
Nkd2Q8VE28 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nkd2Q8VE28 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.58■□□□□ 0.4
Nkd2Q8VE28 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.58■□□□□ 0.4
Nkd2Q8VE28 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Nkd2Q8VE28 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nkd2Q8VE28 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nkd2Q8VE28 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
Nkd2Q8VE28 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.57■□□□□ 0.4
Nkd2Q8VE28 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nkd2Q8VE28 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nkd2Q8VE28 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nkd2Q8VE28 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Nkd2Q8VE28 Gm7291-201ENSMUST00000199147 382 ntBASIC17.57■□□□□ 0.4
Nkd2Q8VE28 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Nkd2Q8VE28 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nkd2Q8VE28 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Nkd2Q8VE28 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nkd2Q8VE28 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Nkd2Q8VE28 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
Nkd2Q8VE28 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Nkd2Q8VE28 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.56■□□□□ 0.4
Nkd2Q8VE28 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nkd2Q8VE28 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nkd2Q8VE28 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nkd2Q8VE28 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nkd2Q8VE28 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nkd2Q8VE28 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.56■□□□□ 0.4
Nkd2Q8VE28 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Nkd2Q8VE28 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.56■□□□□ 0.4
Nkd2Q8VE28 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Nkd2Q8VE28 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkd2Q8VE28 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkd2Q8VE28 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkd2Q8VE28 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Nkd2Q8VE28 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.55■□□□□ 0.4
Nkd2Q8VE28 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkd2Q8VE28 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.55■□□□□ 0.4
Nkd2Q8VE28 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.55■□□□□ 0.4
Nkd2Q8VE28 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.55■□□□□ 0.4
Nkd2Q8VE28 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkd2Q8VE28 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Nkd2Q8VE28 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
Nkd2Q8VE28 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkd2Q8VE28 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkd2Q8VE28 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkd2Q8VE28 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkd2Q8VE28 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Nkd2Q8VE28 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkd2Q8VE28 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.54■□□□□ 0.4
Nkd2Q8VE28 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkd2Q8VE28 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nkd2Q8VE28 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkd2Q8VE28 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkd2Q8VE28 Gm29257-201ENSMUST00000186115 639 ntBASIC17.54■□□□□ 0.4
Nkd2Q8VE28 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nkd2Q8VE28 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.54■□□□□ 0.4
Nkd2Q8VE28 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkd2Q8VE28 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nkd2Q8VE28 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkd2Q8VE28 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkd2Q8VE28 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkd2Q8VE28 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Nkd2Q8VE28 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.54■□□□□ 0.4
Nkd2Q8VE28 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkd2Q8VE28 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkd2Q8VE28 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Nkd2Q8VE28 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms