Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Ddx39aQ8VDW0 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC21.58■■□□□ 1.04
Ddx39aQ8VDW0 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Ddx39aQ8VDW0 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Ddx39aQ8VDW0 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Ddx39aQ8VDW0 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Ddx39aQ8VDW0 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ddx39aQ8VDW0 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ddx39aQ8VDW0 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ddx39aQ8VDW0 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ddx39aQ8VDW0 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ddx39aQ8VDW0 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ddx39aQ8VDW0 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Ddx39aQ8VDW0 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ddx39aQ8VDW0 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ddx39aQ8VDW0 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Ddx39aQ8VDW0 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Ddx39aQ8VDW0 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ddx39aQ8VDW0 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Ddx39aQ8VDW0 Gm38205-201ENSMUST00000192243 258 ntBASIC21.56■■□□□ 1.04
Ddx39aQ8VDW0 Gm10602-201ENSMUST00000098239 609 ntBASIC21.56■■□□□ 1.04
Ddx39aQ8VDW0 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ddx39aQ8VDW0 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ddx39aQ8VDW0 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ddx39aQ8VDW0 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ddx39aQ8VDW0 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ddx39aQ8VDW0 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ddx39aQ8VDW0 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ddx39aQ8VDW0 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC21.55■■□□□ 1.04
Ddx39aQ8VDW0 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Ddx39aQ8VDW0 Spcs1-207ENSMUST00000228767 1008 ntBASIC21.55■■□□□ 1.04
Ddx39aQ8VDW0 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ddx39aQ8VDW0 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ddx39aQ8VDW0 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Ddx39aQ8VDW0 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Ddx39aQ8VDW0 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
Ddx39aQ8VDW0 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC21.55■■□□□ 1.04
Ddx39aQ8VDW0 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ddx39aQ8VDW0 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Ddx39aQ8VDW0 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Ddx39aQ8VDW0 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ddx39aQ8VDW0 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ddx39aQ8VDW0 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Ddx39aQ8VDW0 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC21.54■■□□□ 1.04
Ddx39aQ8VDW0 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ddx39aQ8VDW0 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ddx39aQ8VDW0 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ddx39aQ8VDW0 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ddx39aQ8VDW0 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
Ddx39aQ8VDW0 CT025689.6-201ENSMUST00000224991 1104 ntBASIC21.53■■□□□ 1.04
Ddx39aQ8VDW0 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ddx39aQ8VDW0 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Ddx39aQ8VDW0 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Ddx39aQ8VDW0 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ddx39aQ8VDW0 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ddx39aQ8VDW0 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Ddx39aQ8VDW0 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Ddx39aQ8VDW0 Gm6802-201ENSMUST00000167843 1983 ntBASIC21.52■■□□□ 1.04
Ddx39aQ8VDW0 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.03
Ddx39aQ8VDW0 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ddx39aQ8VDW0 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ddx39aQ8VDW0 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ddx39aQ8VDW0 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.5■■□□□ 1.03
Ddx39aQ8VDW0 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Ddx39aQ8VDW0 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ddx39aQ8VDW0 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ddx39aQ8VDW0 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ddx39aQ8VDW0 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ddx39aQ8VDW0 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Ddx39aQ8VDW0 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ddx39aQ8VDW0 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ddx39aQ8VDW0 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ddx39aQ8VDW0 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Ddx39aQ8VDW0 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC21.49■■□□□ 1.03
Ddx39aQ8VDW0 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Ddx39aQ8VDW0 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC21.49■■□□□ 1.03
Ddx39aQ8VDW0 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC21.49■■□□□ 1.03
Ddx39aQ8VDW0 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Ddx39aQ8VDW0 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ddx39aQ8VDW0 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Ddx39aQ8VDW0 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ddx39aQ8VDW0 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ddx39aQ8VDW0 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ddx39aQ8VDW0 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ddx39aQ8VDW0 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC21.48■■□□□ 1.03
Ddx39aQ8VDW0 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Ddx39aQ8VDW0 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Ddx39aQ8VDW0 CT010467.1-202ENSMUST00000205406 714 ntBASIC21.48■■□□□ 1.03
Ddx39aQ8VDW0 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC21.48■■□□□ 1.03
Ddx39aQ8VDW0 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
Ddx39aQ8VDW0 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ddx39aQ8VDW0 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ddx39aQ8VDW0 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ddx39aQ8VDW0 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ddx39aQ8VDW0 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ddx39aQ8VDW0 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC21.47■■□□□ 1.03
Ddx39aQ8VDW0 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ddx39aQ8VDW0 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ddx39aQ8VDW0 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ddx39aQ8VDW0 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC21.47■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms