Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Top1mtQ8R4U6 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Top1mtQ8R4U6 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
Top1mtQ8R4U6 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
Top1mtQ8R4U6 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
Top1mtQ8R4U6 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC23.19■■□□□ 1.3
Top1mtQ8R4U6 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Top1mtQ8R4U6 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Top1mtQ8R4U6 Gm6139-201ENSMUST00000079261 882 ntBASIC23.19■■□□□ 1.3
Top1mtQ8R4U6 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Top1mtQ8R4U6 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Top1mtQ8R4U6 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Top1mtQ8R4U6 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Top1mtQ8R4U6 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Top1mtQ8R4U6 Gm10571-201ENSMUST00000097869 1638 ntBASIC23.19■■□□□ 1.3
Top1mtQ8R4U6 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Top1mtQ8R4U6 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC23.18■■□□□ 1.3
Top1mtQ8R4U6 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Top1mtQ8R4U6 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Top1mtQ8R4U6 Smad6-203ENSMUST00000179458 273 ntBASIC23.18■■□□□ 1.3
Top1mtQ8R4U6 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC23.18■■□□□ 1.3
Top1mtQ8R4U6 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Top1mtQ8R4U6 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Top1mtQ8R4U6 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Top1mtQ8R4U6 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
Top1mtQ8R4U6 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Top1mtQ8R4U6 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC23.17■■□□□ 1.3
Top1mtQ8R4U6 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC23.17■■□□□ 1.3
Top1mtQ8R4U6 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Top1mtQ8R4U6 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Top1mtQ8R4U6 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
Top1mtQ8R4U6 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Top1mtQ8R4U6 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC23.16■■□□□ 1.3
Top1mtQ8R4U6 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Top1mtQ8R4U6 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Top1mtQ8R4U6 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Top1mtQ8R4U6 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Top1mtQ8R4U6 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC23.15■■□□□ 1.3
Top1mtQ8R4U6 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Top1mtQ8R4U6 Gm45640-201ENSMUST00000210665 1896 ntBASIC23.15■■□□□ 1.3
Top1mtQ8R4U6 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Top1mtQ8R4U6 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Top1mtQ8R4U6 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Top1mtQ8R4U6 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
Top1mtQ8R4U6 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Top1mtQ8R4U6 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Top1mtQ8R4U6 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Top1mtQ8R4U6 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC23.14■■□□□ 1.29
Top1mtQ8R4U6 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC23.14■■□□□ 1.29
Top1mtQ8R4U6 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Top1mtQ8R4U6 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Top1mtQ8R4U6 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Top1mtQ8R4U6 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Top1mtQ8R4U6 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Top1mtQ8R4U6 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Top1mtQ8R4U6 Iqck-206ENSMUST00000208658 2891 ntBASIC23.12■■□□□ 1.29
Top1mtQ8R4U6 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Top1mtQ8R4U6 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC23.12■■□□□ 1.29
Top1mtQ8R4U6 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC23.12■■□□□ 1.29
Top1mtQ8R4U6 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Top1mtQ8R4U6 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Top1mtQ8R4U6 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Top1mtQ8R4U6 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Top1mtQ8R4U6 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
Top1mtQ8R4U6 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
Top1mtQ8R4U6 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Top1mtQ8R4U6 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Top1mtQ8R4U6 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Top1mtQ8R4U6 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Top1mtQ8R4U6 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Top1mtQ8R4U6 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Top1mtQ8R4U6 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Top1mtQ8R4U6 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Top1mtQ8R4U6 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC23.11■■□□□ 1.29
Top1mtQ8R4U6 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Top1mtQ8R4U6 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Top1mtQ8R4U6 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Top1mtQ8R4U6 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Top1mtQ8R4U6 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Top1mtQ8R4U6 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Top1mtQ8R4U6 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
Top1mtQ8R4U6 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Top1mtQ8R4U6 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC23.1■■□□□ 1.29
Top1mtQ8R4U6 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC23.1■■□□□ 1.29
Top1mtQ8R4U6 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
Top1mtQ8R4U6 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Top1mtQ8R4U6 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Top1mtQ8R4U6 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
Top1mtQ8R4U6 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
Top1mtQ8R4U6 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Top1mtQ8R4U6 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Top1mtQ8R4U6 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Top1mtQ8R4U6 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC23.09■■□□□ 1.29
Top1mtQ8R4U6 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC23.09■■□□□ 1.29
Top1mtQ8R4U6 Gm11421-201ENSMUST00000122124 294 ntBASIC23.09■■□□□ 1.29
Top1mtQ8R4U6 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Top1mtQ8R4U6 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Top1mtQ8R4U6 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
Top1mtQ8R4U6 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
Top1mtQ8R4U6 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms