Protein–RNA interactions for Protein: Q8R1G6

Pdlim2, PDZ and LIM domain protein 2, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim2Q8R1G6 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC22.42■■□□□ 1.18
Pdlim2Q8R1G6 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Pdlim2Q8R1G6 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
Pdlim2Q8R1G6 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Pdlim2Q8R1G6 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Pdlim2Q8R1G6 Gm16437-201ENSMUST00000025669 507 ntBASIC22.41■■□□□ 1.18
Pdlim2Q8R1G6 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Pdlim2Q8R1G6 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Pdlim2Q8R1G6 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Pdlim2Q8R1G6 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Pdlim2Q8R1G6 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Pdlim2Q8R1G6 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Pdlim2Q8R1G6 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Pdlim2Q8R1G6 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Pdlim2Q8R1G6 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Pdlim2Q8R1G6 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Pdlim2Q8R1G6 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
Pdlim2Q8R1G6 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Pdlim2Q8R1G6 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
Pdlim2Q8R1G6 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Pdlim2Q8R1G6 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Pdlim2Q8R1G6 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Pdlim2Q8R1G6 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Pdlim2Q8R1G6 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Pdlim2Q8R1G6 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Pdlim2Q8R1G6 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
Pdlim2Q8R1G6 Gm9806-201ENSMUST00000051080 552 ntBASIC22.38■■□□□ 1.17
Pdlim2Q8R1G6 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC22.38■■□□□ 1.17
Pdlim2Q8R1G6 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Pdlim2Q8R1G6 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
Pdlim2Q8R1G6 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Pdlim2Q8R1G6 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
Pdlim2Q8R1G6 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
Pdlim2Q8R1G6 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Pdlim2Q8R1G6 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Pdlim2Q8R1G6 Scarna2-201ENSMUST00000157560 414 ntBASIC22.37■■□□□ 1.17
Pdlim2Q8R1G6 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Pdlim2Q8R1G6 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Pdlim2Q8R1G6 Gm43213-201ENSMUST00000151866 1790 ntBASIC22.37■■□□□ 1.17
Pdlim2Q8R1G6 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Pdlim2Q8R1G6 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Pdlim2Q8R1G6 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
Pdlim2Q8R1G6 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
Pdlim2Q8R1G6 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Pdlim2Q8R1G6 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC22.36■■□□□ 1.17
Pdlim2Q8R1G6 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Pdlim2Q8R1G6 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Pdlim2Q8R1G6 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Pdlim2Q8R1G6 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
Pdlim2Q8R1G6 Gm5828-201ENSMUST00000071842 1860 ntBASIC22.35■■□□□ 1.17
Pdlim2Q8R1G6 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Pdlim2Q8R1G6 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
Pdlim2Q8R1G6 Gm15635-204ENSMUST00000208024 2539 ntBASIC22.35■■□□□ 1.17
Pdlim2Q8R1G6 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Pdlim2Q8R1G6 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Pdlim2Q8R1G6 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
Pdlim2Q8R1G6 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Pdlim2Q8R1G6 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Pdlim2Q8R1G6 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Pdlim2Q8R1G6 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC22.34■■□□□ 1.17
Pdlim2Q8R1G6 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Pdlim2Q8R1G6 Gm6311-201ENSMUST00000073790 878 ntBASIC22.34■■□□□ 1.17
Pdlim2Q8R1G6 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Pdlim2Q8R1G6 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Pdlim2Q8R1G6 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC22.34■■□□□ 1.17
Pdlim2Q8R1G6 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Pdlim2Q8R1G6 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Pdlim2Q8R1G6 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Pdlim2Q8R1G6 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Pdlim2Q8R1G6 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Pdlim2Q8R1G6 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Pdlim2Q8R1G6 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
Pdlim2Q8R1G6 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC22.33■■□□□ 1.17
Pdlim2Q8R1G6 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Pdlim2Q8R1G6 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Pdlim2Q8R1G6 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Pdlim2Q8R1G6 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Pdlim2Q8R1G6 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.16
Pdlim2Q8R1G6 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC22.32■■□□□ 1.16
Pdlim2Q8R1G6 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pdlim2Q8R1G6 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC22.32■■□□□ 1.16
Pdlim2Q8R1G6 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Pdlim2Q8R1G6 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pdlim2Q8R1G6 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pdlim2Q8R1G6 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Pdlim2Q8R1G6 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pdlim2Q8R1G6 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pdlim2Q8R1G6 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
Pdlim2Q8R1G6 Gm7856-201ENSMUST00000117514 1493 ntBASIC22.31■■□□□ 1.16
Pdlim2Q8R1G6 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pdlim2Q8R1G6 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pdlim2Q8R1G6 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pdlim2Q8R1G6 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pdlim2Q8R1G6 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Pdlim2Q8R1G6 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pdlim2Q8R1G6 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC22.31■■□□□ 1.16
Pdlim2Q8R1G6 Gm28536-201ENSMUST00000190971 1317 ntBASIC22.31■■□□□ 1.16
Pdlim2Q8R1G6 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
Pdlim2Q8R1G6 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pdlim2Q8R1G6 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC22.3■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms