Protein–RNA interactions for Protein: Q8K4G2

Col23a1, Collagen alpha-1(XXIII) chain, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col23a1Q8K4G2 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC23.9■■□□□ 1.42
Col23a1Q8K4G2 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
Col23a1Q8K4G2 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
Col23a1Q8K4G2 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC23.9■■□□□ 1.42
Col23a1Q8K4G2 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Col23a1Q8K4G2 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Col23a1Q8K4G2 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
Col23a1Q8K4G2 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Col23a1Q8K4G2 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
Col23a1Q8K4G2 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.42
Col23a1Q8K4G2 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC23.89■■□□□ 1.41
Col23a1Q8K4G2 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC23.89■■□□□ 1.41
Col23a1Q8K4G2 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC23.89■■□□□ 1.41
Col23a1Q8K4G2 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Col23a1Q8K4G2 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Col23a1Q8K4G2 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Col23a1Q8K4G2 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Col23a1Q8K4G2 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Col23a1Q8K4G2 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Col23a1Q8K4G2 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC23.88■■□□□ 1.41
Col23a1Q8K4G2 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Col23a1Q8K4G2 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Col23a1Q8K4G2 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Col23a1Q8K4G2 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Col23a1Q8K4G2 Gm11249-201ENSMUST00000117071 859 ntBASIC23.87■■□□□ 1.41
Col23a1Q8K4G2 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
Col23a1Q8K4G2 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Col23a1Q8K4G2 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Col23a1Q8K4G2 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Col23a1Q8K4G2 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Col23a1Q8K4G2 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Col23a1Q8K4G2 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
Col23a1Q8K4G2 Gm7860-201ENSMUST00000121190 879 ntBASIC23.86■■□□□ 1.41
Col23a1Q8K4G2 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Col23a1Q8K4G2 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC23.86■■□□□ 1.41
Col23a1Q8K4G2 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Col23a1Q8K4G2 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Col23a1Q8K4G2 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Col23a1Q8K4G2 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Col23a1Q8K4G2 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Col23a1Q8K4G2 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Col23a1Q8K4G2 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC23.85■■□□□ 1.41
Col23a1Q8K4G2 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC23.85■■□□□ 1.41
Col23a1Q8K4G2 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC23.85■■□□□ 1.41
Col23a1Q8K4G2 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC23.85■■□□□ 1.41
Col23a1Q8K4G2 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Col23a1Q8K4G2 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Col23a1Q8K4G2 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Col23a1Q8K4G2 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC23.84■■□□□ 1.41
Col23a1Q8K4G2 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC23.84■■□□□ 1.41
Col23a1Q8K4G2 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Col23a1Q8K4G2 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
Col23a1Q8K4G2 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Col23a1Q8K4G2 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Col23a1Q8K4G2 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Col23a1Q8K4G2 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
Col23a1Q8K4G2 Nrn1-203ENSMUST00000223611 1443 ntBASIC23.84■■□□□ 1.41
Col23a1Q8K4G2 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Col23a1Q8K4G2 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
Col23a1Q8K4G2 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
Col23a1Q8K4G2 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
Col23a1Q8K4G2 Mir1199-201ENSMUST00000117015 119 ntBASIC23.83■■□□□ 1.41
Col23a1Q8K4G2 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Col23a1Q8K4G2 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
Col23a1Q8K4G2 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC23.83■■□□□ 1.41
Col23a1Q8K4G2 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Col23a1Q8K4G2 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
Col23a1Q8K4G2 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Col23a1Q8K4G2 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
Col23a1Q8K4G2 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Col23a1Q8K4G2 AC153881.2-201ENSMUST00000214877 204 ntBASIC23.82■■□□□ 1.4
Col23a1Q8K4G2 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC23.82■■□□□ 1.4
Col23a1Q8K4G2 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Col23a1Q8K4G2 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Col23a1Q8K4G2 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC23.82■■□□□ 1.4
Col23a1Q8K4G2 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Col23a1Q8K4G2 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Col23a1Q8K4G2 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Col23a1Q8K4G2 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
Col23a1Q8K4G2 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
Col23a1Q8K4G2 Gm18666-201ENSMUST00000190039 958 ntBASIC23.81■■□□□ 1.4
Col23a1Q8K4G2 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Col23a1Q8K4G2 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC23.81■■□□□ 1.4
Col23a1Q8K4G2 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Col23a1Q8K4G2 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
Col23a1Q8K4G2 AA386476-201ENSMUST00000098781 1665 ntBASIC23.8■■□□□ 1.4
Col23a1Q8K4G2 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Col23a1Q8K4G2 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Col23a1Q8K4G2 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Col23a1Q8K4G2 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Col23a1Q8K4G2 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC23.8■■□□□ 1.4
Col23a1Q8K4G2 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Col23a1Q8K4G2 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Col23a1Q8K4G2 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Col23a1Q8K4G2 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
Col23a1Q8K4G2 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC23.79■■□□□ 1.4
Col23a1Q8K4G2 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Col23a1Q8K4G2 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Col23a1Q8K4G2 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Col23a1Q8K4G2 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms