Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC12.11□□□□□ -0.47
Cystm1Q8K353 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cystm1Q8K353 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cystm1Q8K353 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cystm1Q8K353 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cystm1Q8K353 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Cystm1Q8K353 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cystm1Q8K353 Gm5913-201ENSMUST00000119397 1399 ntBASIC12.1□□□□□ -0.47
Cystm1Q8K353 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cystm1Q8K353 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC12.1□□□□□ -0.47
Cystm1Q8K353 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC12.1□□□□□ -0.47
Cystm1Q8K353 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cystm1Q8K353 Gm9959-201ENSMUST00000068277 390 ntBASIC12.1□□□□□ -0.47
Cystm1Q8K353 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cystm1Q8K353 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cystm1Q8K353 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cystm1Q8K353 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cystm1Q8K353 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cystm1Q8K353 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cystm1Q8K353 AC121598.2-201ENSMUST00000228376 2325 ntBASIC12.1□□□□□ -0.47
Cystm1Q8K353 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cystm1Q8K353 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cystm1Q8K353 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cystm1Q8K353 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cystm1Q8K353 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cystm1Q8K353 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cystm1Q8K353 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cystm1Q8K353 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cystm1Q8K353 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cystm1Q8K353 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cystm1Q8K353 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cystm1Q8K353 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cystm1Q8K353 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cystm1Q8K353 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Cystm1Q8K353 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Cystm1Q8K353 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cystm1Q8K353 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Cystm1Q8K353 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.47
Cystm1Q8K353 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cystm1Q8K353 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cystm1Q8K353 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cystm1Q8K353 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cystm1Q8K353 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cystm1Q8K353 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cystm1Q8K353 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cystm1Q8K353 Gm14117-201ENSMUST00000122417 843 ntBASIC12.08□□□□□ -0.48
Cystm1Q8K353 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cystm1Q8K353 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC12.08□□□□□ -0.48
Cystm1Q8K353 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC12.08□□□□□ -0.48
Cystm1Q8K353 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cystm1Q8K353 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cystm1Q8K353 AC126028.2-201ENSMUST00000228100 1833 ntBASIC12.08□□□□□ -0.48
Cystm1Q8K353 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC12.08□□□□□ -0.48
Cystm1Q8K353 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cystm1Q8K353 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC12.08□□□□□ -0.48
Cystm1Q8K353 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Cystm1Q8K353 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cystm1Q8K353 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cystm1Q8K353 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cystm1Q8K353 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cystm1Q8K353 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Cystm1Q8K353 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cystm1Q8K353 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cystm1Q8K353 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cystm1Q8K353 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cystm1Q8K353 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cystm1Q8K353 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cystm1Q8K353 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cystm1Q8K353 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC12.07□□□□□ -0.48
Cystm1Q8K353 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Cystm1Q8K353 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cystm1Q8K353 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cystm1Q8K353 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC12.07□□□□□ -0.48
Cystm1Q8K353 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cystm1Q8K353 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC12.07□□□□□ -0.48
Cystm1Q8K353 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC12.07□□□□□ -0.48
Cystm1Q8K353 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC12.07□□□□□ -0.48
Cystm1Q8K353 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cystm1Q8K353 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cystm1Q8K353 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cystm1Q8K353 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cystm1Q8K353 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cystm1Q8K353 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cystm1Q8K353 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Cystm1Q8K353 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cystm1Q8K353 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cystm1Q8K353 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cystm1Q8K353 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Cystm1Q8K353 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cystm1Q8K353 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cystm1Q8K353 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Cystm1Q8K353 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Cystm1Q8K353 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cystm1Q8K353 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cystm1Q8K353 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cystm1Q8K353 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cystm1Q8K353 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cystm1Q8K353 Etf1-202ENSMUST00000180351 108 ntBASIC12.06□□□□□ -0.48
Cystm1Q8K353 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC12.06□□□□□ -0.48
Cystm1Q8K353 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms