Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Cchcr1Q8K2I2 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC22.86■■□□□ 1.25
Cchcr1Q8K2I2 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC22.86■■□□□ 1.25
Cchcr1Q8K2I2 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Cchcr1Q8K2I2 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC22.86■■□□□ 1.25
Cchcr1Q8K2I2 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Cchcr1Q8K2I2 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
Cchcr1Q8K2I2 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
Cchcr1Q8K2I2 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
Cchcr1Q8K2I2 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Cchcr1Q8K2I2 Serp2-204ENSMUST00000228055 705 ntBASIC22.85■■□□□ 1.25
Cchcr1Q8K2I2 Gm5576-201ENSMUST00000075809 1236 ntBASIC22.85■■□□□ 1.25
Cchcr1Q8K2I2 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
Cchcr1Q8K2I2 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Cchcr1Q8K2I2 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Cchcr1Q8K2I2 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC22.84■■□□□ 1.25
Cchcr1Q8K2I2 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Cchcr1Q8K2I2 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Cchcr1Q8K2I2 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Cchcr1Q8K2I2 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
Cchcr1Q8K2I2 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC22.84■■□□□ 1.25
Cchcr1Q8K2I2 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC22.84■■□□□ 1.25
Cchcr1Q8K2I2 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Cchcr1Q8K2I2 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Cchcr1Q8K2I2 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Cchcr1Q8K2I2 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Cchcr1Q8K2I2 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Cchcr1Q8K2I2 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC22.83■■□□□ 1.25
Cchcr1Q8K2I2 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Cchcr1Q8K2I2 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
Cchcr1Q8K2I2 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.24
Cchcr1Q8K2I2 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC22.82■■□□□ 1.24
Cchcr1Q8K2I2 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Cchcr1Q8K2I2 Gm42911-201ENSMUST00000199360 1630 ntBASIC22.82■■□□□ 1.24
Cchcr1Q8K2I2 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC22.82■■□□□ 1.24
Cchcr1Q8K2I2 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
Cchcr1Q8K2I2 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC22.82■■□□□ 1.24
Cchcr1Q8K2I2 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC22.82■■□□□ 1.24
Cchcr1Q8K2I2 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC22.82■■□□□ 1.24
Cchcr1Q8K2I2 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Cchcr1Q8K2I2 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Cchcr1Q8K2I2 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Cchcr1Q8K2I2 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC22.82■■□□□ 1.24
Cchcr1Q8K2I2 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Cchcr1Q8K2I2 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Cchcr1Q8K2I2 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Cchcr1Q8K2I2 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Cchcr1Q8K2I2 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Cchcr1Q8K2I2 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Cchcr1Q8K2I2 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Cchcr1Q8K2I2 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Cchcr1Q8K2I2 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Cchcr1Q8K2I2 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Cchcr1Q8K2I2 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC22.81■■□□□ 1.24
Cchcr1Q8K2I2 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
Cchcr1Q8K2I2 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC22.81■■□□□ 1.24
Cchcr1Q8K2I2 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
Cchcr1Q8K2I2 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Cchcr1Q8K2I2 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC22.8■■□□□ 1.24
Cchcr1Q8K2I2 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Cchcr1Q8K2I2 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Cchcr1Q8K2I2 AC124603.1-201ENSMUST00000223843 308 ntBASIC22.8■■□□□ 1.24
Cchcr1Q8K2I2 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Cchcr1Q8K2I2 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Cchcr1Q8K2I2 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC22.79■■□□□ 1.24
Cchcr1Q8K2I2 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Cchcr1Q8K2I2 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC22.79■■□□□ 1.24
Cchcr1Q8K2I2 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Cchcr1Q8K2I2 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC22.79■■□□□ 1.24
Cchcr1Q8K2I2 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC22.79■■□□□ 1.24
Cchcr1Q8K2I2 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Cchcr1Q8K2I2 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC22.78■■□□□ 1.24
Cchcr1Q8K2I2 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Cchcr1Q8K2I2 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Cchcr1Q8K2I2 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
Cchcr1Q8K2I2 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Cchcr1Q8K2I2 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC22.78■■□□□ 1.24
Cchcr1Q8K2I2 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
Cchcr1Q8K2I2 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Cchcr1Q8K2I2 Gm10571-201ENSMUST00000097869 1638 ntBASIC22.78■■□□□ 1.24
Cchcr1Q8K2I2 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC22.78■■□□□ 1.24
Cchcr1Q8K2I2 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Cchcr1Q8K2I2 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Cchcr1Q8K2I2 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
Cchcr1Q8K2I2 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC22.77■■□□□ 1.24
Cchcr1Q8K2I2 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Cchcr1Q8K2I2 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Cchcr1Q8K2I2 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Cchcr1Q8K2I2 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Cchcr1Q8K2I2 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Cchcr1Q8K2I2 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.23
Cchcr1Q8K2I2 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Cchcr1Q8K2I2 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Cchcr1Q8K2I2 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Cchcr1Q8K2I2 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Cchcr1Q8K2I2 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC22.76■■□□□ 1.23
Cchcr1Q8K2I2 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC22.76■■□□□ 1.23
Cchcr1Q8K2I2 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Cchcr1Q8K2I2 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Cchcr1Q8K2I2 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms