Protein–RNA interactions for Protein: Q8K268

Abcf3, ATP-binding cassette sub-family F member 3, mousemouse

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf3Q8K268 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Abcf3Q8K268 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Abcf3Q8K268 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Abcf3Q8K268 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Abcf3Q8K268 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.4■□□□□ 0.7
Abcf3Q8K268 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Abcf3Q8K268 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Abcf3Q8K268 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Abcf3Q8K268 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Abcf3Q8K268 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Abcf3Q8K268 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Abcf3Q8K268 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Abcf3Q8K268 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Abcf3Q8K268 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Abcf3Q8K268 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Abcf3Q8K268 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Abcf3Q8K268 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
Abcf3Q8K268 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Abcf3Q8K268 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Abcf3Q8K268 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Abcf3Q8K268 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.39■□□□□ 0.69
Abcf3Q8K268 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Abcf3Q8K268 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Abcf3Q8K268 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Abcf3Q8K268 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Abcf3Q8K268 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Abcf3Q8K268 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Abcf3Q8K268 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Abcf3Q8K268 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Abcf3Q8K268 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Abcf3Q8K268 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC19.38■□□□□ 0.69
Abcf3Q8K268 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.38■□□□□ 0.69
Abcf3Q8K268 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Abcf3Q8K268 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Abcf3Q8K268 Gm5812-201ENSMUST00000061073 957 ntBASIC19.38■□□□□ 0.69
Abcf3Q8K268 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Abcf3Q8K268 Gm10232-201ENSMUST00000089221 720 ntBASIC19.38■□□□□ 0.69
Abcf3Q8K268 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.38■□□□□ 0.69
Abcf3Q8K268 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Abcf3Q8K268 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Abcf3Q8K268 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Abcf3Q8K268 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Abcf3Q8K268 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Abcf3Q8K268 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Abcf3Q8K268 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Abcf3Q8K268 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Abcf3Q8K268 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Abcf3Q8K268 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Abcf3Q8K268 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Abcf3Q8K268 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.37■□□□□ 0.69
Abcf3Q8K268 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.37■□□□□ 0.69
Abcf3Q8K268 BC021767-201ENSMUST00000126387 1716 ntBASIC19.37■□□□□ 0.69
Abcf3Q8K268 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Abcf3Q8K268 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Abcf3Q8K268 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Abcf3Q8K268 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.36■□□□□ 0.69
Abcf3Q8K268 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Abcf3Q8K268 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Abcf3Q8K268 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Abcf3Q8K268 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Abcf3Q8K268 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.36■□□□□ 0.69
Abcf3Q8K268 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.36■□□□□ 0.69
Abcf3Q8K268 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.36■□□□□ 0.69
Abcf3Q8K268 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Abcf3Q8K268 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Abcf3Q8K268 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Abcf3Q8K268 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Abcf3Q8K268 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Abcf3Q8K268 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Abcf3Q8K268 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Abcf3Q8K268 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Abcf3Q8K268 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Abcf3Q8K268 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Abcf3Q8K268 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Abcf3Q8K268 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Abcf3Q8K268 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Abcf3Q8K268 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Abcf3Q8K268 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Abcf3Q8K268 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.34■□□□□ 0.69
Abcf3Q8K268 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Abcf3Q8K268 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Abcf3Q8K268 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Abcf3Q8K268 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.34■□□□□ 0.69
Abcf3Q8K268 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Abcf3Q8K268 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.33■□□□□ 0.69
Abcf3Q8K268 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
Abcf3Q8K268 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Abcf3Q8K268 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Abcf3Q8K268 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Abcf3Q8K268 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Abcf3Q8K268 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Abcf3Q8K268 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.33■□□□□ 0.69
Abcf3Q8K268 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Abcf3Q8K268 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Abcf3Q8K268 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Abcf3Q8K268 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.33■□□□□ 0.68
Abcf3Q8K268 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.33■□□□□ 0.68
Abcf3Q8K268 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.33■□□□□ 0.68
Abcf3Q8K268 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Abcf3Q8K268 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms