Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.71■□□□□ 0.75
CopaQ8CIE6 Gm5874-201ENSMUST00000096101 508 ntBASIC19.71■□□□□ 0.75
CopaQ8CIE6 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CopaQ8CIE6 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.71■□□□□ 0.75
CopaQ8CIE6 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CopaQ8CIE6 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CopaQ8CIE6 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CopaQ8CIE6 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CopaQ8CIE6 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.71■□□□□ 0.75
CopaQ8CIE6 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CopaQ8CIE6 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
CopaQ8CIE6 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.7■□□□□ 0.74
CopaQ8CIE6 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CopaQ8CIE6 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CopaQ8CIE6 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CopaQ8CIE6 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CopaQ8CIE6 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.69■□□□□ 0.74
CopaQ8CIE6 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CopaQ8CIE6 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.69■□□□□ 0.74
CopaQ8CIE6 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CopaQ8CIE6 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CopaQ8CIE6 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CopaQ8CIE6 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CopaQ8CIE6 Gm43060-201ENSMUST00000200621 289 ntBASIC19.69■□□□□ 0.74
CopaQ8CIE6 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CopaQ8CIE6 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CopaQ8CIE6 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CopaQ8CIE6 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
CopaQ8CIE6 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CopaQ8CIE6 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CopaQ8CIE6 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CopaQ8CIE6 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.68■□□□□ 0.74
CopaQ8CIE6 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CopaQ8CIE6 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CopaQ8CIE6 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CopaQ8CIE6 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CopaQ8CIE6 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CopaQ8CIE6 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CopaQ8CIE6 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CopaQ8CIE6 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.68■□□□□ 0.74
CopaQ8CIE6 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CopaQ8CIE6 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
CopaQ8CIE6 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CopaQ8CIE6 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CopaQ8CIE6 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CopaQ8CIE6 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CopaQ8CIE6 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CopaQ8CIE6 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CopaQ8CIE6 Smad6-203ENSMUST00000179458 273 ntBASIC19.67■□□□□ 0.74
CopaQ8CIE6 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
CopaQ8CIE6 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.67■□□□□ 0.74
CopaQ8CIE6 Gm40848-201ENSMUST00000221998 324 ntBASIC19.67■□□□□ 0.74
CopaQ8CIE6 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CopaQ8CIE6 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.67■□□□□ 0.74
CopaQ8CIE6 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CopaQ8CIE6 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.67■□□□□ 0.74
CopaQ8CIE6 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CopaQ8CIE6 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.66■□□□□ 0.74
CopaQ8CIE6 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC19.66■□□□□ 0.74
CopaQ8CIE6 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CopaQ8CIE6 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.66■□□□□ 0.74
CopaQ8CIE6 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CopaQ8CIE6 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CopaQ8CIE6 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CopaQ8CIE6 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CopaQ8CIE6 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.66■□□□□ 0.74
CopaQ8CIE6 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CopaQ8CIE6 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CopaQ8CIE6 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CopaQ8CIE6 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.65■□□□□ 0.74
CopaQ8CIE6 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CopaQ8CIE6 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.65■□□□□ 0.74
CopaQ8CIE6 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CopaQ8CIE6 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
CopaQ8CIE6 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CopaQ8CIE6 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CopaQ8CIE6 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.65■□□□□ 0.74
CopaQ8CIE6 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CopaQ8CIE6 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CopaQ8CIE6 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CopaQ8CIE6 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CopaQ8CIE6 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
CopaQ8CIE6 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CopaQ8CIE6 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.64■□□□□ 0.73
CopaQ8CIE6 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.64■□□□□ 0.73
CopaQ8CIE6 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CopaQ8CIE6 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CopaQ8CIE6 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CopaQ8CIE6 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CopaQ8CIE6 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CopaQ8CIE6 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CopaQ8CIE6 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.63■□□□□ 0.73
CopaQ8CIE6 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CopaQ8CIE6 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.63■□□□□ 0.73
CopaQ8CIE6 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CopaQ8CIE6 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.63■□□□□ 0.73
CopaQ8CIE6 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CopaQ8CIE6 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CopaQ8CIE6 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CopaQ8CIE6 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 109 ms