Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Sox30Q8CGW4 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Sox30Q8CGW4 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Sox30Q8CGW4 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Sox30Q8CGW4 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC21.3■■□□□ 1
Sox30Q8CGW4 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
Sox30Q8CGW4 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Sox30Q8CGW4 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Sox30Q8CGW4 Gm15820-201ENSMUST00000201566 728 ntBASIC21.3■■□□□ 1
Sox30Q8CGW4 Gm5812-201ENSMUST00000061073 957 ntBASIC21.3■■□□□ 1
Sox30Q8CGW4 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC21.3■■□□□ 1
Sox30Q8CGW4 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Sox30Q8CGW4 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Sox30Q8CGW4 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
Sox30Q8CGW4 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Sox30Q8CGW4 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC21.29■■□□□ 1
Sox30Q8CGW4 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Sox30Q8CGW4 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC21.29■■□□□ 1
Sox30Q8CGW4 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Sox30Q8CGW4 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Sox30Q8CGW4 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Sox30Q8CGW4 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Sox30Q8CGW4 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Sox30Q8CGW4 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC21.28■■□□□ 1
Sox30Q8CGW4 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC21.28■■□□□ 1
Sox30Q8CGW4 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Sox30Q8CGW4 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC21.28■■□□□ 1
Sox30Q8CGW4 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Sox30Q8CGW4 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC21.28■■□□□ 1
Sox30Q8CGW4 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.28■■□□□ 1
Sox30Q8CGW4 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC21.28■■□□□ 1
Sox30Q8CGW4 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC21.28■■□□□ 1
Sox30Q8CGW4 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
Sox30Q8CGW4 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Sox30Q8CGW4 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Sox30Q8CGW4 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC21.27■■□□□ 1
Sox30Q8CGW4 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
Sox30Q8CGW4 Gm42911-201ENSMUST00000199360 1630 ntBASIC21.27■■□□□ 1
Sox30Q8CGW4 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Sox30Q8CGW4 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC21.27■■□□□ 1
Sox30Q8CGW4 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Sox30Q8CGW4 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Sox30Q8CGW4 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Sox30Q8CGW4 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Sox30Q8CGW4 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC21.27■□□□□ 0.99
Sox30Q8CGW4 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
Sox30Q8CGW4 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Sox30Q8CGW4 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Sox30Q8CGW4 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sox30Q8CGW4 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Sox30Q8CGW4 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sox30Q8CGW4 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sox30Q8CGW4 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sox30Q8CGW4 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sox30Q8CGW4 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Sox30Q8CGW4 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC21.25■□□□□ 0.99
Sox30Q8CGW4 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Sox30Q8CGW4 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sox30Q8CGW4 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Sox30Q8CGW4 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sox30Q8CGW4 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Sox30Q8CGW4 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Sox30Q8CGW4 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sox30Q8CGW4 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Sox30Q8CGW4 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sox30Q8CGW4 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sox30Q8CGW4 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Sox30Q8CGW4 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sox30Q8CGW4 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sox30Q8CGW4 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sox30Q8CGW4 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sox30Q8CGW4 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sox30Q8CGW4 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC21.23■□□□□ 0.99
Sox30Q8CGW4 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Sox30Q8CGW4 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sox30Q8CGW4 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sox30Q8CGW4 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sox30Q8CGW4 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.22■□□□□ 0.99
Sox30Q8CGW4 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Sox30Q8CGW4 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sox30Q8CGW4 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sox30Q8CGW4 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sox30Q8CGW4 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sox30Q8CGW4 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Sox30Q8CGW4 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Sox30Q8CGW4 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Sox30Q8CGW4 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC21.21■□□□□ 0.99
Sox30Q8CGW4 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sox30Q8CGW4 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sox30Q8CGW4 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sox30Q8CGW4 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sox30Q8CGW4 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sox30Q8CGW4 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Sox30Q8CGW4 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Sox30Q8CGW4 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC21.2■□□□□ 0.98
Sox30Q8CGW4 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC21.2■□□□□ 0.98
Sox30Q8CGW4 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC21.2■□□□□ 0.98
Sox30Q8CGW4 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC21.2■□□□□ 0.98
Sox30Q8CGW4 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sox30Q8CGW4 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms