Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.89■□□□□ 0.61
Rdh1Q8CGV4 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rdh1Q8CGV4 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rdh1Q8CGV4 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rdh1Q8CGV4 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rdh1Q8CGV4 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rdh1Q8CGV4 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.88■□□□□ 0.61
Rdh1Q8CGV4 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rdh1Q8CGV4 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rdh1Q8CGV4 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rdh1Q8CGV4 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rdh1Q8CGV4 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Rdh1Q8CGV4 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Rdh1Q8CGV4 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rdh1Q8CGV4 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rdh1Q8CGV4 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.88■□□□□ 0.61
Rdh1Q8CGV4 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.88■□□□□ 0.61
Rdh1Q8CGV4 Gm38205-201ENSMUST00000192243 258 ntBASIC18.88■□□□□ 0.61
Rdh1Q8CGV4 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rdh1Q8CGV4 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.88■□□□□ 0.61
Rdh1Q8CGV4 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rdh1Q8CGV4 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rdh1Q8CGV4 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rdh1Q8CGV4 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rdh1Q8CGV4 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rdh1Q8CGV4 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rdh1Q8CGV4 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Rdh1Q8CGV4 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rdh1Q8CGV4 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rdh1Q8CGV4 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rdh1Q8CGV4 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.87■□□□□ 0.61
Rdh1Q8CGV4 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Rdh1Q8CGV4 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rdh1Q8CGV4 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rdh1Q8CGV4 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.86■□□□□ 0.61
Rdh1Q8CGV4 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Rdh1Q8CGV4 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rdh1Q8CGV4 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rdh1Q8CGV4 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rdh1Q8CGV4 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rdh1Q8CGV4 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Rdh1Q8CGV4 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rdh1Q8CGV4 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.86■□□□□ 0.61
Rdh1Q8CGV4 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rdh1Q8CGV4 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rdh1Q8CGV4 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rdh1Q8CGV4 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Rdh1Q8CGV4 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rdh1Q8CGV4 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.86■□□□□ 0.61
Rdh1Q8CGV4 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rdh1Q8CGV4 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rdh1Q8CGV4 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rdh1Q8CGV4 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.85■□□□□ 0.61
Rdh1Q8CGV4 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rdh1Q8CGV4 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rdh1Q8CGV4 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rdh1Q8CGV4 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rdh1Q8CGV4 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.85■□□□□ 0.61
Rdh1Q8CGV4 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rdh1Q8CGV4 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rdh1Q8CGV4 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rdh1Q8CGV4 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Rdh1Q8CGV4 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.84■□□□□ 0.61
Rdh1Q8CGV4 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rdh1Q8CGV4 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rdh1Q8CGV4 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rdh1Q8CGV4 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.84■□□□□ 0.61
Rdh1Q8CGV4 Gm7514-201ENSMUST00000209475 934 ntBASIC18.84■□□□□ 0.61
Rdh1Q8CGV4 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rdh1Q8CGV4 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rdh1Q8CGV4 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rdh1Q8CGV4 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
Rdh1Q8CGV4 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rdh1Q8CGV4 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rdh1Q8CGV4 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rdh1Q8CGV4 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rdh1Q8CGV4 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rdh1Q8CGV4 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.83■□□□□ 0.6
Rdh1Q8CGV4 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.83■□□□□ 0.6
Rdh1Q8CGV4 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rdh1Q8CGV4 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Rdh1Q8CGV4 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.83■□□□□ 0.6
Rdh1Q8CGV4 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rdh1Q8CGV4 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rdh1Q8CGV4 Gm20634-201ENSMUST00000090779 2956 ntBASIC18.83■□□□□ 0.6
Rdh1Q8CGV4 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Rdh1Q8CGV4 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rdh1Q8CGV4 Gm5297-201ENSMUST00000198555 1171 ntBASIC18.82■□□□□ 0.6
Rdh1Q8CGV4 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rdh1Q8CGV4 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rdh1Q8CGV4 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rdh1Q8CGV4 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rdh1Q8CGV4 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rdh1Q8CGV4 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.81■□□□□ 0.6
Rdh1Q8CGV4 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rdh1Q8CGV4 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rdh1Q8CGV4 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.81■□□□□ 0.6
Rdh1Q8CGV4 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rdh1Q8CGV4 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.81■□□□□ 0.6
Rdh1Q8CGV4 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms