Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ShfQ8CG80 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ShfQ8CG80 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ShfQ8CG80 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
ShfQ8CG80 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ShfQ8CG80 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
ShfQ8CG80 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ShfQ8CG80 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ShfQ8CG80 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ShfQ8CG80 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ShfQ8CG80 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ShfQ8CG80 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
ShfQ8CG80 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.28■□□□□ 0.36
ShfQ8CG80 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ShfQ8CG80 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
ShfQ8CG80 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ShfQ8CG80 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ShfQ8CG80 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
ShfQ8CG80 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ShfQ8CG80 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
ShfQ8CG80 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ShfQ8CG80 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.27■□□□□ 0.36
ShfQ8CG80 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.27■□□□□ 0.35
ShfQ8CG80 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ShfQ8CG80 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
ShfQ8CG80 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ShfQ8CG80 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.27■□□□□ 0.35
ShfQ8CG80 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.27■□□□□ 0.35
ShfQ8CG80 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
ShfQ8CG80 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ShfQ8CG80 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
ShfQ8CG80 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
ShfQ8CG80 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.26■□□□□ 0.35
ShfQ8CG80 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC17.26■□□□□ 0.35
ShfQ8CG80 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
ShfQ8CG80 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ShfQ8CG80 Golph3-205ENSMUST00000228671 2842 ntBASIC17.26■□□□□ 0.35
ShfQ8CG80 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ShfQ8CG80 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
ShfQ8CG80 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
ShfQ8CG80 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
ShfQ8CG80 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.25■□□□□ 0.35
ShfQ8CG80 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ShfQ8CG80 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ShfQ8CG80 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ShfQ8CG80 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.25■□□□□ 0.35
ShfQ8CG80 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ShfQ8CG80 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
ShfQ8CG80 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ShfQ8CG80 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ShfQ8CG80 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ShfQ8CG80 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ShfQ8CG80 AC093043.1-201ENSMUST00000226700 898 ntBASIC17.24■□□□□ 0.35
ShfQ8CG80 Serp2-204ENSMUST00000228055 705 ntBASIC17.24■□□□□ 0.35
ShfQ8CG80 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ShfQ8CG80 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ShfQ8CG80 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
ShfQ8CG80 BC021767-201ENSMUST00000126387 1716 ntBASIC17.24■□□□□ 0.35
ShfQ8CG80 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ShfQ8CG80 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ShfQ8CG80 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ShfQ8CG80 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ShfQ8CG80 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
ShfQ8CG80 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ShfQ8CG80 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ShfQ8CG80 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC17.23■□□□□ 0.35
ShfQ8CG80 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ShfQ8CG80 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ShfQ8CG80 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ShfQ8CG80 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC17.23■□□□□ 0.35
ShfQ8CG80 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ShfQ8CG80 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
ShfQ8CG80 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ShfQ8CG80 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ShfQ8CG80 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
ShfQ8CG80 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ShfQ8CG80 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ShfQ8CG80 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ShfQ8CG80 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ShfQ8CG80 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ShfQ8CG80 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.22■□□□□ 0.35
ShfQ8CG80 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC17.22■□□□□ 0.35
ShfQ8CG80 Gm45102-201ENSMUST00000207427 857 ntBASIC17.22■□□□□ 0.35
ShfQ8CG80 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
ShfQ8CG80 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.22■□□□□ 0.35
ShfQ8CG80 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ShfQ8CG80 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.21■□□□□ 0.35
ShfQ8CG80 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ShfQ8CG80 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ShfQ8CG80 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
ShfQ8CG80 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ShfQ8CG80 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
ShfQ8CG80 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.21■□□□□ 0.35
ShfQ8CG80 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ShfQ8CG80 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ShfQ8CG80 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ShfQ8CG80 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ShfQ8CG80 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
ShfQ8CG80 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
ShfQ8CG80 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms