Protein–RNA interactions for Protein: Q8CEZ1

Smco1, Single-pass membrane and coiled-coil domain-containing protein 1, mousemouse

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco1Q8CEZ1 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smco1Q8CEZ1 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.67■□□□□ 0.42
Smco1Q8CEZ1 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smco1Q8CEZ1 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smco1Q8CEZ1 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Smco1Q8CEZ1 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smco1Q8CEZ1 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Smco1Q8CEZ1 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Smco1Q8CEZ1 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smco1Q8CEZ1 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smco1Q8CEZ1 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smco1Q8CEZ1 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smco1Q8CEZ1 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Smco1Q8CEZ1 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smco1Q8CEZ1 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smco1Q8CEZ1 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Smco1Q8CEZ1 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smco1Q8CEZ1 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smco1Q8CEZ1 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smco1Q8CEZ1 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Smco1Q8CEZ1 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Smco1Q8CEZ1 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC17.66■□□□□ 0.42
Smco1Q8CEZ1 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smco1Q8CEZ1 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Smco1Q8CEZ1 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Smco1Q8CEZ1 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Smco1Q8CEZ1 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Smco1Q8CEZ1 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Smco1Q8CEZ1 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smco1Q8CEZ1 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smco1Q8CEZ1 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smco1Q8CEZ1 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smco1Q8CEZ1 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Smco1Q8CEZ1 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Smco1Q8CEZ1 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smco1Q8CEZ1 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Smco1Q8CEZ1 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Smco1Q8CEZ1 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Smco1Q8CEZ1 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.65■□□□□ 0.42
Smco1Q8CEZ1 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.65■□□□□ 0.42
Smco1Q8CEZ1 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smco1Q8CEZ1 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smco1Q8CEZ1 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Smco1Q8CEZ1 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Smco1Q8CEZ1 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.64■□□□□ 0.41
Smco1Q8CEZ1 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smco1Q8CEZ1 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smco1Q8CEZ1 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smco1Q8CEZ1 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smco1Q8CEZ1 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smco1Q8CEZ1 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC17.64■□□□□ 0.41
Smco1Q8CEZ1 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smco1Q8CEZ1 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smco1Q8CEZ1 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Smco1Q8CEZ1 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.64■□□□□ 0.41
Smco1Q8CEZ1 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smco1Q8CEZ1 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Smco1Q8CEZ1 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Smco1Q8CEZ1 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Smco1Q8CEZ1 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Smco1Q8CEZ1 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Smco1Q8CEZ1 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smco1Q8CEZ1 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.63■□□□□ 0.41
Smco1Q8CEZ1 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smco1Q8CEZ1 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
Smco1Q8CEZ1 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Smco1Q8CEZ1 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smco1Q8CEZ1 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.63■□□□□ 0.41
Smco1Q8CEZ1 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smco1Q8CEZ1 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smco1Q8CEZ1 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smco1Q8CEZ1 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smco1Q8CEZ1 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Smco1Q8CEZ1 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
Smco1Q8CEZ1 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Smco1Q8CEZ1 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smco1Q8CEZ1 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Smco1Q8CEZ1 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.62■□□□□ 0.41
Smco1Q8CEZ1 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smco1Q8CEZ1 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smco1Q8CEZ1 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Smco1Q8CEZ1 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smco1Q8CEZ1 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smco1Q8CEZ1 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Smco1Q8CEZ1 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smco1Q8CEZ1 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Smco1Q8CEZ1 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smco1Q8CEZ1 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smco1Q8CEZ1 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Smco1Q8CEZ1 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Smco1Q8CEZ1 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smco1Q8CEZ1 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Smco1Q8CEZ1 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Smco1Q8CEZ1 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Smco1Q8CEZ1 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.61■□□□□ 0.41
Smco1Q8CEZ1 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smco1Q8CEZ1 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Smco1Q8CEZ1 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.61■□□□□ 0.41
Smco1Q8CEZ1 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.61■□□□□ 0.41
Smco1Q8CEZ1 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms