Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vcpip1Q8CDG3 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vcpip1Q8CDG3 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vcpip1Q8CDG3 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Vcpip1Q8CDG3 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.78■□□□□ 0.92
Vcpip1Q8CDG3 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vcpip1Q8CDG3 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vcpip1Q8CDG3 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vcpip1Q8CDG3 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Vcpip1Q8CDG3 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Vcpip1Q8CDG3 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vcpip1Q8CDG3 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Vcpip1Q8CDG3 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vcpip1Q8CDG3 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Vcpip1Q8CDG3 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Vcpip1Q8CDG3 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Vcpip1Q8CDG3 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.77■□□□□ 0.92
Vcpip1Q8CDG3 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.77■□□□□ 0.92
Vcpip1Q8CDG3 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Vcpip1Q8CDG3 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Vcpip1Q8CDG3 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.77■□□□□ 0.91
Vcpip1Q8CDG3 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Vcpip1Q8CDG3 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Vcpip1Q8CDG3 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Vcpip1Q8CDG3 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Vcpip1Q8CDG3 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Vcpip1Q8CDG3 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
Vcpip1Q8CDG3 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
Vcpip1Q8CDG3 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Vcpip1Q8CDG3 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Vcpip1Q8CDG3 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC20.75■□□□□ 0.91
Vcpip1Q8CDG3 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.75■□□□□ 0.91
Vcpip1Q8CDG3 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.75■□□□□ 0.91
Vcpip1Q8CDG3 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Vcpip1Q8CDG3 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Vcpip1Q8CDG3 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Vcpip1Q8CDG3 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vcpip1Q8CDG3 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vcpip1Q8CDG3 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.74■□□□□ 0.91
Vcpip1Q8CDG3 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vcpip1Q8CDG3 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Vcpip1Q8CDG3 Gm12821-201ENSMUST00000120022 600 ntBASIC20.74■□□□□ 0.91
Vcpip1Q8CDG3 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Vcpip1Q8CDG3 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Vcpip1Q8CDG3 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vcpip1Q8CDG3 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Vcpip1Q8CDG3 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vcpip1Q8CDG3 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vcpip1Q8CDG3 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Vcpip1Q8CDG3 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vcpip1Q8CDG3 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.73■□□□□ 0.91
Vcpip1Q8CDG3 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vcpip1Q8CDG3 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vcpip1Q8CDG3 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vcpip1Q8CDG3 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vcpip1Q8CDG3 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Vcpip1Q8CDG3 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Vcpip1Q8CDG3 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.72■□□□□ 0.91
Vcpip1Q8CDG3 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.72■□□□□ 0.91
Vcpip1Q8CDG3 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vcpip1Q8CDG3 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vcpip1Q8CDG3 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vcpip1Q8CDG3 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Vcpip1Q8CDG3 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Vcpip1Q8CDG3 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vcpip1Q8CDG3 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.71■□□□□ 0.91
Vcpip1Q8CDG3 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Vcpip1Q8CDG3 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vcpip1Q8CDG3 AA386476-201ENSMUST00000098781 1665 ntBASIC20.71■□□□□ 0.91
Vcpip1Q8CDG3 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Vcpip1Q8CDG3 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vcpip1Q8CDG3 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vcpip1Q8CDG3 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vcpip1Q8CDG3 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vcpip1Q8CDG3 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vcpip1Q8CDG3 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.7■□□□□ 0.9
Vcpip1Q8CDG3 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vcpip1Q8CDG3 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vcpip1Q8CDG3 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.7■□□□□ 0.9
Vcpip1Q8CDG3 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.7■□□□□ 0.9
Vcpip1Q8CDG3 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Vcpip1Q8CDG3 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vcpip1Q8CDG3 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.7■□□□□ 0.9
Vcpip1Q8CDG3 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Vcpip1Q8CDG3 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vcpip1Q8CDG3 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vcpip1Q8CDG3 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.69■□□□□ 0.9
Vcpip1Q8CDG3 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.69■□□□□ 0.9
Vcpip1Q8CDG3 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vcpip1Q8CDG3 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.69■□□□□ 0.9
Vcpip1Q8CDG3 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vcpip1Q8CDG3 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.69■□□□□ 0.9
Vcpip1Q8CDG3 Gm43231-201ENSMUST00000202960 2258 ntBASIC20.69■□□□□ 0.9
Vcpip1Q8CDG3 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vcpip1Q8CDG3 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vcpip1Q8CDG3 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Vcpip1Q8CDG3 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Vcpip1Q8CDG3 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vcpip1Q8CDG3 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
Vcpip1Q8CDG3 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms