Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SynpoQ8CC35 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SynpoQ8CC35 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SynpoQ8CC35 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SynpoQ8CC35 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SynpoQ8CC35 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SynpoQ8CC35 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.66■□□□□ 0.58
SynpoQ8CC35 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SynpoQ8CC35 Gm5874-201ENSMUST00000096101 508 ntBASIC18.66■□□□□ 0.58
SynpoQ8CC35 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SynpoQ8CC35 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.65■□□□□ 0.58
SynpoQ8CC35 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
SynpoQ8CC35 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SynpoQ8CC35 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SynpoQ8CC35 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SynpoQ8CC35 Gm43060-201ENSMUST00000200621 289 ntBASIC18.65■□□□□ 0.58
SynpoQ8CC35 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SynpoQ8CC35 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SynpoQ8CC35 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SynpoQ8CC35 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SynpoQ8CC35 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SynpoQ8CC35 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SynpoQ8CC35 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
SynpoQ8CC35 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SynpoQ8CC35 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.64■□□□□ 0.58
SynpoQ8CC35 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
SynpoQ8CC35 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
SynpoQ8CC35 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.64■□□□□ 0.57
SynpoQ8CC35 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SynpoQ8CC35 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SynpoQ8CC35 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SynpoQ8CC35 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SynpoQ8CC35 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SynpoQ8CC35 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SynpoQ8CC35 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
SynpoQ8CC35 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SynpoQ8CC35 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.63■□□□□ 0.57
SynpoQ8CC35 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SynpoQ8CC35 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SynpoQ8CC35 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SynpoQ8CC35 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
SynpoQ8CC35 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SynpoQ8CC35 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SynpoQ8CC35 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SynpoQ8CC35 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SynpoQ8CC35 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SynpoQ8CC35 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
SynpoQ8CC35 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SynpoQ8CC35 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SynpoQ8CC35 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SynpoQ8CC35 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
SynpoQ8CC35 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SynpoQ8CC35 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SynpoQ8CC35 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SynpoQ8CC35 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.61■□□□□ 0.57
SynpoQ8CC35 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SynpoQ8CC35 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SynpoQ8CC35 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SynpoQ8CC35 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SynpoQ8CC35 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
SynpoQ8CC35 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SynpoQ8CC35 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SynpoQ8CC35 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
SynpoQ8CC35 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SynpoQ8CC35 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SynpoQ8CC35 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
SynpoQ8CC35 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SynpoQ8CC35 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.61■□□□□ 0.57
SynpoQ8CC35 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SynpoQ8CC35 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SynpoQ8CC35 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SynpoQ8CC35 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SynpoQ8CC35 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.6■□□□□ 0.57
SynpoQ8CC35 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SynpoQ8CC35 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.6■□□□□ 0.57
SynpoQ8CC35 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.6■□□□□ 0.57
SynpoQ8CC35 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SynpoQ8CC35 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SynpoQ8CC35 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SynpoQ8CC35 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
SynpoQ8CC35 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SynpoQ8CC35 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
SynpoQ8CC35 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.59■□□□□ 0.57
SynpoQ8CC35 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SynpoQ8CC35 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SynpoQ8CC35 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SynpoQ8CC35 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SynpoQ8CC35 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SynpoQ8CC35 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SynpoQ8CC35 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
SynpoQ8CC35 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SynpoQ8CC35 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
SynpoQ8CC35 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SynpoQ8CC35 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SynpoQ8CC35 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SynpoQ8CC35 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SynpoQ8CC35 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.58■□□□□ 0.57
SynpoQ8CC35 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SynpoQ8CC35 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.57
SynpoQ8CC35 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms