Protein–RNA interactions for Protein: Q8C8C1

Rtp1, Receptor-transporting protein 1, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp1Q8C8C1 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC22.31■■□□□ 1.16
Rtp1Q8C8C1 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rtp1Q8C8C1 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rtp1Q8C8C1 Gm13534-201ENSMUST00000121169 513 ntBASIC22.31■■□□□ 1.16
Rtp1Q8C8C1 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rtp1Q8C8C1 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rtp1Q8C8C1 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Rtp1Q8C8C1 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC22.3■■□□□ 1.16
Rtp1Q8C8C1 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Rtp1Q8C8C1 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
Rtp1Q8C8C1 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Rtp1Q8C8C1 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Rtp1Q8C8C1 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Rtp1Q8C8C1 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Rtp1Q8C8C1 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
Rtp1Q8C8C1 Gm27275-201ENSMUST00000184318 272 ntBASIC22.29■■□□□ 1.16
Rtp1Q8C8C1 Gm26524-201ENSMUST00000192339 390 ntBASIC22.29■■□□□ 1.16
Rtp1Q8C8C1 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
Rtp1Q8C8C1 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC22.29■■□□□ 1.16
Rtp1Q8C8C1 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
Rtp1Q8C8C1 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rtp1Q8C8C1 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
Rtp1Q8C8C1 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
Rtp1Q8C8C1 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Rtp1Q8C8C1 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC22.28■■□□□ 1.16
Rtp1Q8C8C1 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rtp1Q8C8C1 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
Rtp1Q8C8C1 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Rtp1Q8C8C1 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Rtp1Q8C8C1 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Rtp1Q8C8C1 Krtap5-1-202ENSMUST00000188274 742 ntBASIC22.27■■□□□ 1.16
Rtp1Q8C8C1 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Rtp1Q8C8C1 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
Rtp1Q8C8C1 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
Rtp1Q8C8C1 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Rtp1Q8C8C1 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.15
Rtp1Q8C8C1 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Rtp1Q8C8C1 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Rtp1Q8C8C1 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
Rtp1Q8C8C1 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC22.26■■□□□ 1.15
Rtp1Q8C8C1 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC22.26■■□□□ 1.15
Rtp1Q8C8C1 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Rtp1Q8C8C1 Gm43006-201ENSMUST00000197702 1602 ntBASIC22.26■■□□□ 1.15
Rtp1Q8C8C1 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Rtp1Q8C8C1 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
Rtp1Q8C8C1 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Rtp1Q8C8C1 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Rtp1Q8C8C1 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC22.25■■□□□ 1.15
Rtp1Q8C8C1 Gm6576-201ENSMUST00000169678 883 ntBASIC22.25■■□□□ 1.15
Rtp1Q8C8C1 Arhgef33-211ENSMUST00000225658 473 ntBASIC22.25■■□□□ 1.15
Rtp1Q8C8C1 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Rtp1Q8C8C1 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Rtp1Q8C8C1 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Rtp1Q8C8C1 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
Rtp1Q8C8C1 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC22.24■■□□□ 1.15
Rtp1Q8C8C1 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Rtp1Q8C8C1 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Rtp1Q8C8C1 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
Rtp1Q8C8C1 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Rtp1Q8C8C1 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Rtp1Q8C8C1 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
Rtp1Q8C8C1 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC22.23■■□□□ 1.15
Rtp1Q8C8C1 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Rtp1Q8C8C1 Rab3c-203ENSMUST00000224180 967 ntBASIC22.23■■□□□ 1.15
Rtp1Q8C8C1 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Rtp1Q8C8C1 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
Rtp1Q8C8C1 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Rtp1Q8C8C1 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC22.23■■□□□ 1.15
Rtp1Q8C8C1 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Rtp1Q8C8C1 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Rtp1Q8C8C1 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Rtp1Q8C8C1 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Rtp1Q8C8C1 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
Rtp1Q8C8C1 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Rtp1Q8C8C1 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Rtp1Q8C8C1 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Rtp1Q8C8C1 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Rtp1Q8C8C1 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Rtp1Q8C8C1 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
Rtp1Q8C8C1 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rtp1Q8C8C1 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Rtp1Q8C8C1 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
Rtp1Q8C8C1 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
Rtp1Q8C8C1 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Rtp1Q8C8C1 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rtp1Q8C8C1 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Rtp1Q8C8C1 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rtp1Q8C8C1 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rtp1Q8C8C1 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rtp1Q8C8C1 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rtp1Q8C8C1 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Rtp1Q8C8C1 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rtp1Q8C8C1 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rtp1Q8C8C1 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
Rtp1Q8C8C1 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rtp1Q8C8C1 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Rtp1Q8C8C1 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rtp1Q8C8C1 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Rtp1Q8C8C1 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Rtp1Q8C8C1 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms