Protein–RNA interactions for Protein: Q8BV79

Trank1, TPR and ankyrin repeat-containing protein 1, mousemouse

Predictions only

Length 2,999 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trank1Q8BV79 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trank1Q8BV79 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trank1Q8BV79 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trank1Q8BV79 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Trank1Q8BV79 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Trank1Q8BV79 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trank1Q8BV79 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Trank1Q8BV79 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trank1Q8BV79 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trank1Q8BV79 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trank1Q8BV79 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Trank1Q8BV79 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Trank1Q8BV79 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Trank1Q8BV79 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trank1Q8BV79 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trank1Q8BV79 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Trank1Q8BV79 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Trank1Q8BV79 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Trank1Q8BV79 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trank1Q8BV79 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trank1Q8BV79 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Trank1Q8BV79 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC16.94■□□□□ 0.3
Trank1Q8BV79 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trank1Q8BV79 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trank1Q8BV79 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trank1Q8BV79 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trank1Q8BV79 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trank1Q8BV79 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trank1Q8BV79 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trank1Q8BV79 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trank1Q8BV79 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trank1Q8BV79 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC16.94■□□□□ 0.3
Trank1Q8BV79 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trank1Q8BV79 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trank1Q8BV79 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trank1Q8BV79 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Trank1Q8BV79 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trank1Q8BV79 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.93■□□□□ 0.3
Trank1Q8BV79 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trank1Q8BV79 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trank1Q8BV79 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC16.93■□□□□ 0.3
Trank1Q8BV79 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trank1Q8BV79 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trank1Q8BV79 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trank1Q8BV79 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trank1Q8BV79 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Trank1Q8BV79 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trank1Q8BV79 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trank1Q8BV79 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trank1Q8BV79 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trank1Q8BV79 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trank1Q8BV79 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC16.92■□□□□ 0.3
Trank1Q8BV79 Gm44672-201ENSMUST00000206944 1098 ntBASIC16.92■□□□□ 0.3
Trank1Q8BV79 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Trank1Q8BV79 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trank1Q8BV79 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trank1Q8BV79 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trank1Q8BV79 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trank1Q8BV79 Snhg20-203ENSMUST00000182811 2153 ntBASIC16.92■□□□□ 0.3
Trank1Q8BV79 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trank1Q8BV79 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trank1Q8BV79 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC16.91■□□□□ 0.3
Trank1Q8BV79 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trank1Q8BV79 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trank1Q8BV79 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Trank1Q8BV79 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Trank1Q8BV79 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trank1Q8BV79 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trank1Q8BV79 Dio3-201ENSMUST00000097228 1449 ntBASIC16.9■□□□□ 0.3
Trank1Q8BV79 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trank1Q8BV79 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC16.9■□□□□ 0.3
Trank1Q8BV79 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trank1Q8BV79 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC16.9■□□□□ 0.3
Trank1Q8BV79 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trank1Q8BV79 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trank1Q8BV79 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC16.9■□□□□ 0.3
Trank1Q8BV79 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trank1Q8BV79 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC16.89■□□□□ 0.3
Trank1Q8BV79 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trank1Q8BV79 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC16.89■□□□□ 0.29
Trank1Q8BV79 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trank1Q8BV79 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trank1Q8BV79 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC16.89■□□□□ 0.29
Trank1Q8BV79 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC16.89■□□□□ 0.29
Trank1Q8BV79 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trank1Q8BV79 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Trank1Q8BV79 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trank1Q8BV79 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trank1Q8BV79 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC16.89■□□□□ 0.29
Trank1Q8BV79 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
Trank1Q8BV79 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC16.89■□□□□ 0.29
Trank1Q8BV79 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Trank1Q8BV79 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trank1Q8BV79 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trank1Q8BV79 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trank1Q8BV79 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trank1Q8BV79 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trank1Q8BV79 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trank1Q8BV79 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC16.88■□□□□ 0.29
Trank1Q8BV79 Gm6576-201ENSMUST00000169678 883 ntBASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms