Protein–RNA interactions for Protein: Q8BUV6

Lsm11, U7 snRNA-associated Sm-like protein LSm11, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm11Q8BUV6 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
Lsm11Q8BUV6 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC16.45■□□□□ 0.22
Lsm11Q8BUV6 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lsm11Q8BUV6 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lsm11Q8BUV6 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lsm11Q8BUV6 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lsm11Q8BUV6 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lsm11Q8BUV6 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lsm11Q8BUV6 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Lsm11Q8BUV6 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC16.45■□□□□ 0.22
Lsm11Q8BUV6 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Lsm11Q8BUV6 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC16.45■□□□□ 0.22
Lsm11Q8BUV6 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Lsm11Q8BUV6 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Lsm11Q8BUV6 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Lsm11Q8BUV6 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lsm11Q8BUV6 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lsm11Q8BUV6 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lsm11Q8BUV6 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lsm11Q8BUV6 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lsm11Q8BUV6 Gm10657-201ENSMUST00000193528 1031 ntBASIC16.44■□□□□ 0.22
Lsm11Q8BUV6 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lsm11Q8BUV6 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Lsm11Q8BUV6 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lsm11Q8BUV6 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Lsm11Q8BUV6 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
Lsm11Q8BUV6 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lsm11Q8BUV6 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC16.44■□□□□ 0.22
Lsm11Q8BUV6 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lsm11Q8BUV6 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lsm11Q8BUV6 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lsm11Q8BUV6 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC16.43■□□□□ 0.22
Lsm11Q8BUV6 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lsm11Q8BUV6 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Lsm11Q8BUV6 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Lsm11Q8BUV6 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC16.43■□□□□ 0.22
Lsm11Q8BUV6 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC16.43■□□□□ 0.22
Lsm11Q8BUV6 Gm9870-201ENSMUST00000063874 645 ntBASIC16.43■□□□□ 0.22
Lsm11Q8BUV6 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Lsm11Q8BUV6 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Lsm11Q8BUV6 Rncr4-201ENSMUST00000194541 2234 ntBASIC16.43■□□□□ 0.22
Lsm11Q8BUV6 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lsm11Q8BUV6 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC16.43■□□□□ 0.22
Lsm11Q8BUV6 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lsm11Q8BUV6 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lsm11Q8BUV6 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lsm11Q8BUV6 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lsm11Q8BUV6 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lsm11Q8BUV6 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lsm11Q8BUV6 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lsm11Q8BUV6 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lsm11Q8BUV6 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Lsm11Q8BUV6 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC16.42■□□□□ 0.22
Lsm11Q8BUV6 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Lsm11Q8BUV6 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
Lsm11Q8BUV6 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lsm11Q8BUV6 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lsm11Q8BUV6 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lsm11Q8BUV6 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lsm11Q8BUV6 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lsm11Q8BUV6 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lsm11Q8BUV6 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lsm11Q8BUV6 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lsm11Q8BUV6 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lsm11Q8BUV6 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lsm11Q8BUV6 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC16.41■□□□□ 0.22
Lsm11Q8BUV6 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Lsm11Q8BUV6 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lsm11Q8BUV6 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lsm11Q8BUV6 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Lsm11Q8BUV6 BC021767-201ENSMUST00000126387 1716 ntBASIC16.41■□□□□ 0.22
Lsm11Q8BUV6 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Lsm11Q8BUV6 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Lsm11Q8BUV6 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lsm11Q8BUV6 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lsm11Q8BUV6 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lsm11Q8BUV6 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lsm11Q8BUV6 AA386476-201ENSMUST00000098781 1665 ntBASIC16.4■□□□□ 0.22
Lsm11Q8BUV6 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lsm11Q8BUV6 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lsm11Q8BUV6 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lsm11Q8BUV6 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Lsm11Q8BUV6 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC16.4■□□□□ 0.22
Lsm11Q8BUV6 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Lsm11Q8BUV6 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lsm11Q8BUV6 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lsm11Q8BUV6 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lsm11Q8BUV6 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lsm11Q8BUV6 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Lsm11Q8BUV6 Gm37352-201ENSMUST00000193908 2181 ntBASIC16.4■□□□□ 0.22
Lsm11Q8BUV6 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lsm11Q8BUV6 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Lsm11Q8BUV6 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Lsm11Q8BUV6 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lsm11Q8BUV6 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lsm11Q8BUV6 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lsm11Q8BUV6 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lsm11Q8BUV6 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lsm11Q8BUV6 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Lsm11Q8BUV6 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms