Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC20.58■□□□□ 0.89
Rd3Q8BRE0 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Rd3Q8BRE0 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.58■□□□□ 0.89
Rd3Q8BRE0 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Rd3Q8BRE0 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rd3Q8BRE0 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Rd3Q8BRE0 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rd3Q8BRE0 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Rd3Q8BRE0 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rd3Q8BRE0 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rd3Q8BRE0 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rd3Q8BRE0 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.57■□□□□ 0.88
Rd3Q8BRE0 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rd3Q8BRE0 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rd3Q8BRE0 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rd3Q8BRE0 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Rd3Q8BRE0 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Rd3Q8BRE0 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rd3Q8BRE0 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rd3Q8BRE0 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rd3Q8BRE0 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rd3Q8BRE0 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rd3Q8BRE0 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rd3Q8BRE0 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Rd3Q8BRE0 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.55■□□□□ 0.88
Rd3Q8BRE0 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rd3Q8BRE0 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC20.55■□□□□ 0.88
Rd3Q8BRE0 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.55■□□□□ 0.88
Rd3Q8BRE0 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.55■□□□□ 0.88
Rd3Q8BRE0 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Rd3Q8BRE0 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rd3Q8BRE0 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rd3Q8BRE0 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rd3Q8BRE0 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rd3Q8BRE0 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rd3Q8BRE0 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rd3Q8BRE0 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rd3Q8BRE0 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Rd3Q8BRE0 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC20.54■□□□□ 0.88
Rd3Q8BRE0 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC20.54■□□□□ 0.88
Rd3Q8BRE0 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rd3Q8BRE0 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Rd3Q8BRE0 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.54■□□□□ 0.88
Rd3Q8BRE0 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rd3Q8BRE0 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rd3Q8BRE0 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rd3Q8BRE0 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rd3Q8BRE0 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rd3Q8BRE0 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rd3Q8BRE0 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rd3Q8BRE0 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC20.53■□□□□ 0.88
Rd3Q8BRE0 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rd3Q8BRE0 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rd3Q8BRE0 Gm12441-201ENSMUST00000121806 588 ntBASIC20.53■□□□□ 0.88
Rd3Q8BRE0 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC20.53■□□□□ 0.88
Rd3Q8BRE0 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rd3Q8BRE0 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Rd3Q8BRE0 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Rd3Q8BRE0 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rd3Q8BRE0 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.53■□□□□ 0.88
Rd3Q8BRE0 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rd3Q8BRE0 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rd3Q8BRE0 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rd3Q8BRE0 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC20.52■□□□□ 0.88
Rd3Q8BRE0 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Rd3Q8BRE0 Gm3807-201ENSMUST00000193520 1168 ntBASIC20.52■□□□□ 0.88
Rd3Q8BRE0 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rd3Q8BRE0 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rd3Q8BRE0 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.52■□□□□ 0.88
Rd3Q8BRE0 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Rd3Q8BRE0 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Rd3Q8BRE0 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rd3Q8BRE0 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Rd3Q8BRE0 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.51■□□□□ 0.87
Rd3Q8BRE0 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rd3Q8BRE0 Gm13146-201ENSMUST00000118508 780 ntBASIC20.51■□□□□ 0.87
Rd3Q8BRE0 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
Rd3Q8BRE0 Gm6420-201ENSMUST00000193885 723 ntBASIC20.51■□□□□ 0.87
Rd3Q8BRE0 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.51■□□□□ 0.87
Rd3Q8BRE0 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Rd3Q8BRE0 Gm6365-201ENSMUST00000054711 744 ntBASIC20.51■□□□□ 0.87
Rd3Q8BRE0 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rd3Q8BRE0 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.51■□□□□ 0.87
Rd3Q8BRE0 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Rd3Q8BRE0 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rd3Q8BRE0 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rd3Q8BRE0 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rd3Q8BRE0 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rd3Q8BRE0 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rd3Q8BRE0 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rd3Q8BRE0 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rd3Q8BRE0 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rd3Q8BRE0 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
Rd3Q8BRE0 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rd3Q8BRE0 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rd3Q8BRE0 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.5■□□□□ 0.87
Rd3Q8BRE0 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rd3Q8BRE0 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rd3Q8BRE0 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Rd3Q8BRE0 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms